Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi378g00007 ATGGCTGCTCAGTTACCTTGCGCGCCGAATATAATTTCTGCTCCGTTCGCGAACCGGACCAGGATCCATTTCCCACATCGACCTCACTCCCACGCTTTTTCCGGTTCGACCAGGCACTTTCTTCGCGGCTCGCTTTCCGTTTCCCGGTTCGGATTAAAGCCCGGTTTCTTGCCCGAACCGGATGACGCCGAAGGCTTCATCAGGGAGCTGTTTGGCCGAGCGGAGGGCCTTCTTTACACGATTGCCGACGCCGCCGTTTCTTCTTCCGATACGGCGGCAACCACCGCCAAACAAAGCAACGACTGGCTTTCTGGAATATCCAATTACATGGAGAGTGTTCTCAAGGTTCTCAAGGATGGGCTATCTGCTTTGCATGTTCCGTACGCATATGGTTTTGCAATTATACTGCTTACAGTTCTTGTAAAAGCTGCCACCTTTCCATTGACAAAAAAACAGGTAGAATCTAGCTTGGCTATGCGATCTTTGCAACCTCAAGTAAAGGCTATCCAGCAACGCTATGCTGGTGATCAGGAGAGAATTCAACTTGAAACAGCTCGGTTGTATAAATTAGCTGGCATTAATCCTCTAGCAGGATGCCTGCCTACACTCGCAACAATACCAGTATGGATTGGGCTATATCGAGCCCTTTCAAATGTGGCAGATGAGGGACTCCTAACTGAAGGCTTTTTCTGGATACCTTCTCTTGCTGGTCCAACTACAGTTGCAGCTCGTCAAAATGGCAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGTCAGATACTTTGGCGTACCTTGTCTTGCCCGTGTTGCTGGTTGTCTCTCAGTACATCTCTGTCCAAATAATACAGTCATCACAGACTAATGACCCCAACCTGAAGACTTCTCAAGCCTTAACCAAGGTCCTTCCCTTAATGATTGGTTACTTTGCACTTTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCCCAACAAACATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCGGTGATGCAAGTCCAAGATGATATCATGAAGGACGACCTAAAGCAGATTCAGAAGCCAGTATCTAAACTAAATTCCAAAAAAACGGAAGAAGCTAGACAAGACGAGAAACTGACATCAGAGGTTCCACGACCTGGGGAAAGATTTAGGCAGCTAATGGAGCAAGAGACAAAAAGAAAACAACAGAGAGAAGAAGAAAAAAGAAAAGCTGAGGAAGCAGTGGCAAAAGCAACTAAAGTAGACGAGACACATGAGAAAACAATTGAAGGAGGAAATCAAGCTGGACGTGATTTAGTTGTTGGAAAATCTCAGTCTGTGGCCACTGATACTGATCCATCCATATCTGGAGTAGTAAATGGTAATCCATTAAGTAAAGACTTGGAGGAAAGTCAAAATTCTACATCTACATCTGAGACACAAAATAATGGAGGTTCTGCTCATTTCAATGTTGTTGGAACAAATGAGAAAATTCTTGACAAGGAACCAAGAGAAGTATTAACAACTACATCTACCTCAAACAAGCAACCTCCTGGAGAAGACCCAGATCACGTGACAAAGGATTGA 1614 0.4492 MAAQLPCAPNIISAPFANRTRIHFPHRPHSHAFSGSTRHFLRGSLSVSRFGLKPGFLPEPDDAEGFIRELFGRAEGLLYTIADAAVSSSDTAATTAKQSNDWLSGISNYMESVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRSLQPQVKAIQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIIQSSQTNDPNLKTSQALTKVLPLMIGYFALSVPSGLSLYWLTNNILSTAQQTWLQKLGGAKNPVMQVQDDIMKDDLKQIQKPVSKLNSKKTEEARQDEKLTSEVPRPGERFRQLMEQETKRKQQREEEKRKAEEAVAKATKVDETHEKTIEGGNQAGRDLVVGKSQSVATDTDPSISGVVNGNPLSKDLEESQNSTSTSETQNNGGSAHFNVVGTNEKILDKEPREVLTTTSTSNKQPPGEDPDHVTKD 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi378g00007 537 MobiDBLite consensus disorder prediction 514 528 - -
Gabi378g00007 537 CDD 5TM_YidC_Alb3 131 344 IPR047196 -
Gabi378g00007 537 Coils Coil 402 430 - -
Gabi378g00007 537 MobiDBLite consensus disorder prediction 370 441 - -
Gabi378g00007 537 MobiDBLite consensus disorder prediction 370 537 - -
Gabi378g00007 537 MobiDBLite consensus disorder prediction 453 499 - -
Gabi378g00007 537 Pfam 60Kd inner membrane protein 130 344 IPR028055 -
Gabi378g00007 537 NCBIfam membrane protein insertase YidC 130 343 IPR028055 -
Gabi378g00007 537 PANTHER OXA1 85 412 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi378g00007 Gabi-Chr378 51581 57701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi378g00007 67 417 Chloroplast and Mitochondria Gene Families AT2G28800 56.901 7.48e-133 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi378g00007 K03217 - gmx:100802546 820.461