Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3788g00028 ATGAGAGAACAAAGATTTGAAGATAAGGTGATTAACATGCATGGATTAACTCTTCCTCTTACTATAAACAATTTACTTTGTTGTGCTCCCACTTTAAGATATTCTTCCATACCCACTTTTCAAATTTGGTATGGAAGTGGTTTCAATCCTCTTATGGTCGATTCACGCTGCTACATGAAGCATGAGACCAAAGGAAGAAGAGGTAGCAAAAGAAACAACGTTGTCAGAGCAAGCCTTGGCGAGTCTCCGTATGATGTCTTGGGCGTGTCTCCATCCGCAACTGTTGATGAAATCAAGAAGGCATATCGGAAACTTGCTCTCAAGTATCATCCCGATGTCAATAAACAGGATAAGGCGCAGGAGAAATTTATGAGAATAAAACACGCATACAATACATTGCTAAATTCTAGTTCCCGCAAAAAATATGATTCTGGAAATCGTGGTTCTGATTTTTATCAAAGAAGCCAAAATAGGAATTCGCAAGCTGAAGAAGAATTTTATGGATTAGGTAATTTTATGAGGGATGTTCAAATAACAATAGGTAGATATATACTCTCTGAGGACTTCTTTAAGGATCTTCAAGAAGAATTCAGGAATTGGGAAGCCAATGCTGCTTCACAAGGAAAGCCAAAGAGTCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTCAATATTGTTGATGCAAATGACAATTATAAAACGCCTCAGGAAGGAAACCCATCTAAAGTATCTGGGACAGAGACACCAAGCAACAGCGCTCAAGGTAAAGCTAGCAAGGGAAACGGAAACATTGAGGATAACCTTGATGAAATAGAAGCCACTTTGGCTCAGTTGAAAAGGGAATTAGGCTTATAG 882 0.39 MREQRFEDKVINMHGLTLPLTINNLLCCAPTLRYSSIPTFQIWYGSGFNPLMVDSRCYMKHETKGRRGSKRNNVVRASLGESPYDVLGVSPSATVDEIKKAYRKLALKYHPDVNKQDKAQEKFMRIKHAYNTLLNSSSRKKYDSGNRGSDFYQRSQNRNSQAEEEFYGLGNFMRDVQITIGRYILSEDFFKDLQEEFRNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNIVDANDNYKTPQEGNPSKVSGTETPSNSAQGKASKGNGNIEDNLDEIEATLAQLKRELGL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3788g00028 293 PRINTS DnaJ domain signature 84 102 IPR001623 -
Gabi3788g00028 293 PRINTS DnaJ domain signature 102 117 IPR001623 -
Gabi3788g00028 293 PRINTS DnaJ domain signature 118 138 IPR001623 -
Gabi3788g00028 293 CDD DnaJ 83 135 IPR001623 -
Gabi3788g00028 293 Pfam DnaJ domain 83 143 IPR001623 -
Gabi3788g00028 293 Gene3D DnaJ domain 80 208 IPR036869 -
Gabi3788g00028 293 MobiDBLite consensus disorder prediction 238 277 - -
Gabi3788g00028 293 MobiDBLite consensus disorder prediction 238 270 - -
Gabi3788g00028 293 SMART dnaj_3 81 138 IPR001623 -
Gabi3788g00028 293 Coils Coil 270 293 - -
Gabi3788g00028 293 ProSiteProfiles dnaJ domain profile. 82 146 IPR001623 -
Gabi3788g00028 293 MobiDBLite consensus disorder prediction 137 157 - -
Gabi3788g00028 293 SUPERFAMILY Chaperone J-domain 65 142 IPR036869 -
Gabi3788g00028 293 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 63 232 - -
Gabi3788g00028 293 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3788g00028 Gabi-Chr3788 303941 308514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3788g00028 84 144 C2H2 Transcription Factor Family AT1G74250 38.806 3.20e-07 49.7