Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3788g00015 ATGAATGGGTTTGAGTTGGATGATTCATCTTCCCCTTCATCTGGCACAAGCTCAATCAGAGAATCCACGGAACCGAATAAATATTCCAACCCCTTCCTCAGATACATAAGTGACATCCTCATGGATGAGGAAGATGATTTGGAGCGCAAACCCTGCATGTTGCAGGAATGTTTAAGACTCCAGGCTGCTGAAAAATCATTCTATGATGCTCTTGGTCAAACCTATCCTTCATCACTTCATGATGATAGCGTAAGTAGCACAGACCCAGATGGAGATTATGGTCGCACTGCAAGTTTTGAGAGCAATGGAAGCTGCACCACTGATAATTCATATGATTCTGACAGTGTCAACCTTGTGGGTGAGTTTGACTCTTCTTTCCTTCAACTACAAACCCCTCTAATTGATTCCCCTGAAAACACATATTATGTAGCTCCTGATCCATTTAGGGAGTCACAAGCTACTGGCCATTTAGGTTCGGGTTCGGGTTCGGGTTCAGGTTCAGGTTCAGCACCTAGAGAAAAGAGAATCCATGAGATGGATGATACTTGTCATGAACAAGAGAGAAGAGGCAGCAAGGTTTCAGCTGTCTTTTCTGACGATTCAGAGCCACCAGAGATATTGGATGAGGTACTGCGTTATCAGAGTGGAAGAAGTCATCGTGCTGCTACTGAACCATCACAGAATGTTGACTCAGGAGGAGGAGGAGGAGGAGGTGCATCCAATGGAAAGGCAACACGTTTGCGTTCAAAGAAAGTGTCCAACACCAACATGGAAGAAACAACCGTAGATTTATGGACCCTGCTAACTCAATGTGCACAGGCTGTGGCAAACTATGACCAAAGGAATGCAAATGACCTACTCAAGCACATTAGGCAACACTCTTCACCTTTTGGGGACGGACTCCAGCGTTTAGCTCATTATTTTGCCAATGGCCTTGAGACAAGGTTGGCTGCTGGAACACCATCATATATGCCACTAGATGTCGCAACTGCTGCAGATATGTTGAAAGCTTACAAACTATTTGTTACTGCGTCTCCTTTGCAAAGGATGACAAATTATTTGACAACCAATACAATTATTAGACTGGTGAAAAATGAGACCAGTGTTCATATTATTGACTTTGGCATTTGCTATGGTTTCCAGTGGCCATGCCTTATCAAGAAACTGTCAGAAAGACATGGTGGTCCTCCAAAGCTTCATATAACAGGAATTGATCTTCCTCAGCCAGGATTTAGGCCTGAAGAAAGGGTTGAGGAGACAGGGAAGCGTTTGGGAAACTACTGCAAAAAGTTCAAGGTTCCATTTGAATACAATTGCCTTGCACAGAAATGGGAAACTATCAAACTTGAGGATCTGAAGATAGACAGGAATGAGATAACTGTTGTGGGCTGTTTTTACCGACTGAAGAACCTGCCTGATGAAACTGTGGCAACAAGCTGTTCAAGAGATGCTGTGTTGAAGTTGATCAGGAAGATAAATCCAAACATGTTCATACATGGGATTGTAAATGGTACTTATAGTGCACCATTTTTCCTCACTCGGTTCAGGGAGGCACTTTACCACTTCTCATCGCTGTTTGATATGTTTGAGGCTAATGTGCCTCGTGAAGATACGCAAAGGGTGATGCTTGAGAAAGGCTTGTTTGGAAGGGATGCCATCAATGTCATAGCGTGTGAAGGGGCAGAGAGGGTTGAAAGGCCAGAGACCTACAAGCAGTGGCAGATTAGGAACCGGAGAGCTGGGTTCAAGCAACTGCGGTTCGATCCAGAGTTTGTGAATGATATCAAATCGGTGGTGAAGATGGAATATCATAAAGATTTTATTGTCGATGAGGATGGCAAGTGGGTTTTGCAGGGGTGGAAAGGGCGTATTCTAAATGCTTTTTCTGTTTGGGTTCCAGCTTAA 1905 0.4394 MNGFELDDSSSPSSGTSSIRESTEPNKYSNPFLRYISDILMDEEDDLERKPCMLQECLRLQAAEKSFYDALGQTYPSSLHDDSVSSTDPDGDYGRTASFESNGSCTTDNSYDSDSVNLVGEFDSSFLQLQTPLIDSPENTYYVAPDPFRESQATGHLGSGSGSGSGSGSAPREKRIHEMDDTCHEQERRGSKVSAVFSDDSEPPEILDEVLRYQSGRSHRAATEPSQNVDSGGGGGGGASNGKATRLRSKKVSNTNMEETTVDLWTLLTQCAQAVANYDQRNANDLLKHIRQHSSPFGDGLQRLAHYFANGLETRLAAGTPSYMPLDVATAADMLKAYKLFVTASPLQRMTNYLTTNTIIRLVKNETSVHIIDFGICYGFQWPCLIKKLSERHGGPPKLHITGIDLPQPGFRPEERVEETGKRLGNYCKKFKVPFEYNCLAQKWETIKLEDLKIDRNEITVVGCFYRLKNLPDETVATSCSRDAVLKLIRKINPNMFIHGIVNGTYSAPFFLTRFREALYHFSSLFDMFEANVPREDTQRVMLEKGLFGRDAINVIACEGAERVERPETYKQWQIRNRRAGFKQLRFDPEFVNDIKSVVKMEYHKDFIVDEDGKWVLQGWKGRILNAFSVWVPA 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3788g00015 634 MobiDBLite consensus disorder prediction 154 168 - -
Gabi3788g00015 634 MobiDBLite consensus disorder prediction 171 195 - -
Gabi3788g00015 634 MobiDBLite consensus disorder prediction 138 250 - -
Gabi3788g00015 634 MobiDBLite consensus disorder prediction 219 234 - -
Gabi3788g00015 634 MobiDBLite consensus disorder prediction 1 29 - -
Gabi3788g00015 634 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 228 625 IPR005202 -
Gabi3788g00015 634 Pfam GRAS domain family 266 631 IPR005202 -
Gabi3788g00015 634 MobiDBLite consensus disorder prediction 77 110 - -
Gabi3788g00015 634 ProSiteProfiles GRAS family profile. 255 632 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3788g00015 Gabi-Chr3788 180111 182518 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3788g00015 28 633 GRAS Transcription Factor Family AT2G29060 44.051 2.98e-169 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3788g00015 GRAS 2.3e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3788g00015 - - aprc:113855970 997.653