Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3788g00013 ATGGATCCAAACTTTGGTGCAAGCAGGTACGAATTGGATGATGAAGGGAACATTGTGATAATCTCTGATTCAAACGATTGGGATCTCAACGGACACCACCGGAACTTTGTTGATTTTACAAGCTCTGATGCTCCTTTTTATGAACCCGGCGGGGACCCGCTTAGTTTTGCTCCGTCAGAACCGGTTGTTTCATCCGCGGATGGCCCCTTTGCAGCCATTGCCACGGTGGCGGATCCTTCTCTTGAAGACACAGACTTTTCAGAAACCTTCAGGTACATAAACCAAATTCTAATGGAAGAGAACTTTGAGAGCAAACCGTGCATGTTTTATGACCCTCTGAGTCTGCAAAACACTGAGAAATCATTCTATGATGTTCTGAAAGCAATAGAGCCTCTTTCCCCTAATCAACACCCTCTTGACATTCTTGAGGGAAATTGTTTTACTACTGATTCTAGGAGCAGTGCTATTTCTAACGAGTTGAAGCCCCCTTCACCTGATACACCTGTTTCTGGTGTTTCTTCTTTGCATTCCATTTCCCACACGCCCTCTCAACTTGTTTCTCCTCATGATTTGAGTAATATTAGTGATGGTGCGTTCGATATGGATTCTTCTGTAAGCAAGCTCTTGGCTCAAAATATCTTTAGTGATGTAGACTCTATGTTGCTGTTTAAAAGAGGGTTAGAGGAAGCTAGTAAGTTTCTTCCTCAAAGACCTCAGCTTTTTACTGGTTTGGAGAGCAGCACTGTGTCTCCTGAGCCAAAGCGAGAGGATGCTATAAGGGAGAATTCACATGGGTGCAAGAGCAGAAAGAATCATGAGCGCCAAGGTGATGATGGTGAAGAAGAAGGAAGAAGCAACAAGCAGTCTGCTGTTTGTGTTGAGGAGGAGAGTGATATATCTGATATGTTTGACCGTGTGTTGCTTAGTATTGAAAATGTTCCACTGTGTGCTGAACAGCAGGATGTATCAGTTATAGATAGTAGTAACACACAGTCAAGTAAACAACCGCATTCATCTGATGGAAGGAAGTCTCGTTCCAAGAAACAAGGCAGGAAGAAGGAAACCGTGGATTTGAGGACCCTTTTGGTTCTATGTGCACAAGCTGTGTCTGCCAGTGACACCAGGACTGCTAATGAACTGCTAAAGCAGATTAGGCAACATTCTTCACCGTCAGGTGATGCATCACAGAGGTTGGCTCATTTCTTCGCCAATGCCCTAGAGGCACGCTCTGTTGGCACTGGTGCTGGAACCCAAATATTTTATATGAGCCTCAAGAAGTTCACTGCTGCTGATTTCCTGAGAGCTTACCAAGTTTTTATATCTGCTTGCCCTTTCAAGAAATTTGCACATTTCTTTGCAAATAAAGCTATTATGAAAGCAGCTGAAAAGGCCGAAGCCCTTCATATTATTGATTTTGGTATCCTGTATGGTTTCCAGTGGCCAATTCTCATCAAGTTTTTATCAAACAGAAGTGGGGGGCCTCCCAAGCTACGCATCACAGGAATAGAGTATCCCCAAGCAGGCTTTCGTCCCACAGAAAGAATTGAGGAGACTGGTCGTCGTCTAGCTGACTATTGCGAGCGTTTCAATGTTCCCTTTGAGTACAAGGCCATAGCATCACGAAACTGGGAAACCATTCCAATTGAAGACCTTGAAATTAAGAGCAATGAGGTACTTGCTGTGAACTGTCTGGTAAGGTTTAAAAATTTACTCGATGAGACAATTGAAGGGAATAGTCCCAGAAATGCGATTCTGAATTTAATCAGGAAGATAAATCCGGATATTTTTGTTCAATCCATAATAAATGGATCTTACAATGCCCCTTTCTTTGTCACACGCTTCAGGGAGTCACTGTTCCATTCTTCTGCAATTTATGATATGCTTGATACTCTCATATCCCGTGAAAATGAATGGAGGTTGATGCTTGAGAGAGAGTTTATGGGCCGAGAGATTATGAATGTTGTAGCATGTGAAGGTTTTGAGAGGGTTGAGAGGCCCGAGACATACAAACAATGGCAGGCTAGGAATGCAAGGGCTGGTTTTAGGCAGCTCCCACTGGATAAGGAGCTAATGTCCAAATTTAGGGATAAGTTAAGAGAATGGTACCAGCACCATGGAGATTTTGTCTTTGATGAAGATAACAACTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCTTCCACTTGTTGGGTTCCAGCATAA 2208 0.4334 MDPNFGASRYELDDEGNIVIISDSNDWDLNGHHRNFVDFTSSDAPFYEPGGDPLSFAPSEPVVSSADGPFAAIATVADPSLEDTDFSETFRYINQILMEENFESKPCMFYDPLSLQNTEKSFYDVLKAIEPLSPNQHPLDILEGNCFTTDSRSSAISNELKPPSPDTPVSGVSSLHSISHTPSQLVSPHDLSNISDGAFDMDSSVSKLLAQNIFSDVDSMLLFKRGLEEASKFLPQRPQLFTGLESSTVSPEPKREDAIRENSHGCKSRKNHERQGDDGEEEGRSNKQSAVCVEEESDISDMFDRVLLSIENVPLCAEQQDVSVIDSSNTQSSKQPHSSDGRKSRSKKQGRKKETVDLRTLLVLCAQAVSASDTRTANELLKQIRQHSSPSGDASQRLAHFFANALEARSVGTGAGTQIFYMSLKKFTAADFLRAYQVFISACPFKKFAHFFANKAIMKAAEKAEALHIIDFGILYGFQWPILIKFLSNRSGGPPKLRITGIEYPQAGFRPTERIEETGRRLADYCERFNVPFEYKAIASRNWETIPIEDLEIKSNEVLAVNCLVRFKNLLDETIEGNSPRNAILNLIRKINPDIFVQSIINGSYNAPFFVTRFRESLFHSSAIYDMLDTLISRENEWRLMLEREFMGREIMNVVACEGFERVERPETYKQWQARNARAGFRQLPLDKELMSKFRDKLREWYQHHGDFVFDEDNNWMLQGWKGRILYASTCWVPA 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3788g00013 735 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 317 728 IPR005202 -
Gabi3788g00013 735 MobiDBLite consensus disorder prediction 250 291 - -
Gabi3788g00013 735 MobiDBLite consensus disorder prediction 324 353 - -
Gabi3788g00013 735 MobiDBLite consensus disorder prediction 153 189 - -
Gabi3788g00013 735 Pfam GRAS domain family 358 732 IPR005202 -
Gabi3788g00013 735 ProSiteProfiles GRAS family profile. 349 733 IPR005202 -
Gabi3788g00013 735 MobiDBLite consensus disorder prediction 244 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3788g00013 Gabi-Chr3788 169823 172602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3788g00013 89 735 GRAS Transcription Factor Family AT1G07530 49.855 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3788g00013 GRAS 5.7e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3788g00013 - - aprc:113855970 1030.78