Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3788g00012 ATGGATCCAAACTTTTGTGGAAGCAGGTACGAATTGGATGATGAAGGGAACATTGTGATAATCTCTGATCCAAACGATTGGGATCTCAACGGACACCACCGGAACCTTGTTGATTTTACAAGCTCCGATGCTCCTTTTTATGAACCCGGTGGGGACCCACTTAGTTTTGCTCCGTCAGAACCGGTTGTTTCATCCGCGGATGGCCCCTTTGCAGCCATGGCCACGGTGGCGGATCCTTCTCTTGAAGACACGGACTTTTCAGAAACTGTCAGGTACATAAGCCAAATTCTTATGGAAGAGAACTTTGAGAGGAAACCGTGCATGTGTTATGACCCTCTGAGTCTGCAAGACACTGAGAAATCGTTCTATGATGCTCTGAAAGCAATAGAGCCTCTTTCCCCAAATCAACACCCTCTTGACATTCTTGAGGGTAATTGTTTTACTACTGATTCTGGGAGCAGTGCTAGTTCTAACGAGTTGAAGCCCCCTTCACCTGATACACCTGTTTCTGGTGTTTCTTCTTTGCATTCCATTTCCCACACGCCTTCTCAACTTGTTTCTCCGCATGATTTGAGTAATATTAGTGATGGTGCGTTCGATATGGATTCTTCTGTAAGCAAGCTCTTGGCTCAAAATATCTTTAGTGATGTAGACTCTATGTTGCAGTTTAAAAGAGGGTTAGAGGAAGCTAGTAAGTTTCTTCCTCAAAGACCTCAGCTTTTTACTGGTTTGGAGAGCAGCACTGTGTCTCCTGAGCCAAAGGGAGAGGATGCTACTAGGGAGAATTCACATGAGTTGAAGAGTAGAAAGAATCATGAGCGCCAAGGTGATGATGGTGAAGAAGAAGGAAGAAGCAACAAGCAGTCTGCTGTTTGTGTTGAGGAGGAGAGTGAAATATCTGATATGTTTGACCGTGTGTTACTTAGTATTGAAAATGTTCCACTGTGTGCTGAACAGCAGGATGTATCAGTTATAGATAGTAGTAACACACACTCAAGTGAACATCCACATTCATCTGATGGAAGGAAGTCTCGTTCCAAGAAACAAGGGAGGAAGAAGGAAACCGTGGATTTGAGAACCCTTTTGGTTCTGTGTGCACAAGCTGTGTCTGCCAGTGACACCAGGACTGCTAATGAACTGCTAAAGCAGATTAGGCAACATTCTTCACCGTTAGGTGATGCATCACAGAGGTTGGCTCATTACTTCGCCAATGGCCTAGAGGCACGCTTTGTTGGTGCCAGTACTGGAACCCAAATATTTTATATGAGCCTCAAGAAGATCACCGCTGCTGATTTCCTGAGAGCTTACCAAGTTTTTATATCTGCTTGCCCTTTCAAGAAATTTGCACATTGCTTTGCAAATAGAGCAATTATGAAAGCAGCTGAAAAGGCAGAAACCCTTCATATTATTGATTTTGGTATCCTGTATGGTTTCCAGTGGCCAATTCTCATCAAGTTTTTATCAAATAGAAGTGGGGGGCCTCCCAAGCTACGCATCACCGGAATAGAGTATCCCCAAGCAGGCTTTCGTCCCGCAGAAAGAATTGAGGAGACTGGTCGTCGTCTAGCTAACTATTGCGAGCGTTTCAATGTTCCGTTTGAGTACAAGGCCATAGCATCACGAAACTGGGAAACCATTCCAATTGAAGACCTTAAAATTAAGAGCAATGAGGTACTTGCTGTGAACTGTCTGGTAAGGTTTAAAAATTTACTCGATGAGACAATTGAAGTGAATAGTCCCAGAAACGCGGTTCTGAATTTAATCAGGAAGATAAATCCAGATATTTTTGTTCAATCCATAATAAATGGATCTTACAATGCCCCTTTCTTTGTCACACGCTTCAGGGAGGCACTGTTCCATTATTCTGCTGCTTATGATATGTATGATACTCTCATATCCCGTGACAATGAATGGAGGTTGATGATTGAGAAAGAGTTTATGGGCCGAGAGATTATGAATGTTGTGGCATGTGAAGGTTTTGAGAGGGTTGAGAGGCCCGAGACATACAAACAATGGCAGGGTAGGAATGCAAGGGCTGGTTTTAGGCAGGTCCCACTGGATAAGGAGCTAATGTCCAAATTTAGGGATAAGTTAAGAGAATGGTACCAGCATCATAGAGATTTTGTCTTTGATGAAGATAACAACTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCTTCCACTTGTTGGGTTCCAGCATAA 2208 0.4343 MDPNFCGSRYELDDEGNIVIISDPNDWDLNGHHRNLVDFTSSDAPFYEPGGDPLSFAPSEPVVSSADGPFAAMATVADPSLEDTDFSETVRYISQILMEENFERKPCMCYDPLSLQDTEKSFYDALKAIEPLSPNQHPLDILEGNCFTTDSGSSASSNELKPPSPDTPVSGVSSLHSISHTPSQLVSPHDLSNISDGAFDMDSSVSKLLAQNIFSDVDSMLQFKRGLEEASKFLPQRPQLFTGLESSTVSPEPKGEDATRENSHELKSRKNHERQGDDGEEEGRSNKQSAVCVEEESEISDMFDRVLLSIENVPLCAEQQDVSVIDSSNTHSSEHPHSSDGRKSRSKKQGRKKETVDLRTLLVLCAQAVSASDTRTANELLKQIRQHSSPLGDASQRLAHYFANGLEARFVGASTGTQIFYMSLKKITAADFLRAYQVFISACPFKKFAHCFANRAIMKAAEKAETLHIIDFGILYGFQWPILIKFLSNRSGGPPKLRITGIEYPQAGFRPAERIEETGRRLANYCERFNVPFEYKAIASRNWETIPIEDLKIKSNEVLAVNCLVRFKNLLDETIEVNSPRNAVLNLIRKINPDIFVQSIINGSYNAPFFVTRFREALFHYSAAYDMYDTLISRDNEWRLMIEKEFMGREIMNVVACEGFERVERPETYKQWQGRNARAGFRQVPLDKELMSKFRDKLREWYQHHRDFVFDEDNNWMLQGWKGRILYASTCWVPA 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3788g00012 735 MobiDBLite consensus disorder prediction 254 291 - -
Gabi3788g00012 735 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 304 728 IPR005202 -
Gabi3788g00012 735 MobiDBLite consensus disorder prediction 142 189 - -
Gabi3788g00012 735 MobiDBLite consensus disorder prediction 146 189 - -
Gabi3788g00012 735 MobiDBLite consensus disorder prediction 238 293 - -
Gabi3788g00012 735 MobiDBLite consensus disorder prediction 325 353 - -
Gabi3788g00012 735 Pfam GRAS domain family 358 732 IPR005202 -
Gabi3788g00012 735 ProSiteProfiles GRAS family profile. 349 733 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3788g00012 Gabi-Chr3788 152889 156036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3788g00012 89 735 GRAS Transcription Factor Family AT1G07530 51.744 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3788g00012 GRAS 3.6e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3788g00012 - - aprc:113855970 1057.74