Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3786g00082 ATGGAAGGAATAGAAGAAAGAAACGCAGGGCTTGAACACCACGATGGTGTTTATATGGGGTCCTGTTTATCAAATCTCATATTATCAGGGGGGACAAACACCCTTGACTCAATTTTCTCTCATTACACACCACCAAATACCACTATTACTATTGCTACCAGCTCTACGATGGAGCCATTAAGCACTTTGGGATCCTCAGTTTACCATCGCCAGAGAGATATCCTGCAAAAGTTCTATGAGGAAAACCGGTTGAATGGTTCTTCTGTTCCCAATTCCTCAAAAAATAAATTCCTAAACAGCATATGCACCAGCCCTTGTAACAAAAAGGTTTACAGGGGAGTGAGACAGAGACAGTGGGGAAAATGGGTCGCAGAGATTAGACTCCCTCAGAACAGAATGAGGGTGTGGTTGGGCACTTACGACACTCCTGAAGCTGCTGCTTATGCTTATGATCGTGCTGCTTATAAGCTCAGAGGTGAATATGCTCGTTTGAATTTCCCAGATGTGAAGGACCCGTGTAACTTATTAGGACTCGGAGATTCCACGAGATTGAACGCTTTGAAGAGCTCCGTGGATGCTAAAATTCAAGCCATGTGTCAAAAGGTTAAGAGAGACAAGGCCAAGAAGCGTTCTTCGAAGAAACTAAATTCTGGTAATAACGTTGACAACAGTGAGAGTGAGAAACCACAGGCACAGAAGATAGAGTCATCTTCTTGTTCTTGTTCTTCATCTTCGTTGCCGTCAAAGGTAATAGAGGAGTCGGATTTTGAAGACTGTTCCTTGGCAAGGATGCCATCCTTTGATGTTGAGTTGATTTGGGAAGTTTTGGCCAATTAG 837 0.4337 MEGIEERNAGLEHHDGVYMGSCLSNLILSGGTNTLDSIFSHYTPPNTTITIATSSTMEPLSTLGSSVYHRQRDILQKFYEENRLNGSSVPNSSKNKFLNSICTSPCNKKVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDTPEAAAYAYDRAAYKLRGEYARLNFPDVKDPCNLLGLGDSTRLNALKSSVDAKIQAMCQKVKRDKAKKRSSKKLNSGNNVDNSESEKPQAQKIESSSCSCSSSSLPSKVIEESDFEDCSLARMPSFDVELIWEVLAN 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3786g00082 278 PRINTS Ethylene responsive element binding protein signature 149 169 IPR001471 GO:0003700|GO:0006355
Gabi3786g00082 278 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Gabi3786g00082 278 Pfam AP2 domain 110 160 IPR001471 GO:0003700|GO:0006355
Gabi3786g00082 278 Gene3D AP2/ERF domain 110 168 IPR036955 GO:0003700|GO:0006355
Gabi3786g00082 278 FunFam Ethylene-responsive transcription factor 2 109 168 - -
Gabi3786g00082 278 SUPERFAMILY DNA-binding domain 110 168 IPR016177 GO:0003677
Gabi3786g00082 278 MobiDBLite consensus disorder prediction 204 247 - -
Gabi3786g00082 278 CDD AP2 111 169 IPR001471 GO:0003700|GO:0006355
Gabi3786g00082 278 ProSiteProfiles AP2/ERF domain profile. 110 167 IPR001471 GO:0003700|GO:0006355
Gabi3786g00082 278 SMART rav1_2 110 173 IPR001471 GO:0003700|GO:0006355
Gabi3786g00082 278 MobiDBLite consensus disorder prediction 214 247 - -
Gabi3786g00082 278 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 46 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3786g00082 Gabi-Chr3786 627610 628446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3786g00082 21 278 AP2-EREBP Transcription Factor Family AT1G64380 46.057 8.04e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi3786g00082 AP2 9.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3786g00082 - - qsa:O6P43_024033 295.049