Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3786g00076 ATGGAGAATGACCGGAGCTGGGAGCAGAACACACTCATCAATGAGCTAGTTCAAGGGATGGAGGTAGCAAGGAAGTTGAAGGCAGACTTGAGGACACCATATTCAGTTGACACAAGGGATATGATGGTTCAGAGGATATTATCTTCTTATGAAAAAGCTTTACTAATTCTAAGATGGAATGTATCAACTTCCGAGTTGCAGGGCATGAGTCAAGCAACATCAACTTTGTTACCAGAGTCCCCAATATCTGTCAACGGAAGTCCTCTGAGGAAGGACATTGATGGGGCCATCAAGGATCCCGAGGAGGTTAAACACGATTCAAAGAAAAGAAAGATAATTCCCAAATGGGTGGATCAAATAAGAGTGAGCTCCGAGAGTGGCCTCGAAGGACCATATGAAGATGGCTACAACTGGAGAAAATATGGTCAGAAAGACATCCTCGGTACCAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAACACTCAGGGCTGCTGGGCCACCAAGCAAGTACAGAGATCAGATGAAGATCCCACTATATTTGACATAACTTACAGAGGATTGCACACCTGTTCTCAGGGAAACAATGCCGTTCAGCCAACTAAATCACCGGACAAACAAGAGAGACCACAAAGTCATAATAATGATATTCACCATGCACAGGCATCACAAGAAAGCCTTGCAAAGTTCAGAAACATCTTGACTGTCAGTACGGATAAGCTGGGAAATGAAGAAATGACATATCCTTTCACTTTCCCTTCGACCTCATTTGGATGCATGCCACGAGAAAACCACAGCTTGATTCCTTTGCCCCTAGAGAATGATTCCTTCTTGAGCAGCCTTTTCCAAGCACACTTATTATCTCAAACAACACCGGAATCAAACTATTTCTCATCTCCAACTTTCCAGATGAATGAGTTTGATGGGGACTACAAGAAGCCACGTTCGGAATCTGATATTACTGAGATCATTTCCACCAACACATCAGCCACCAATTCTCCAATTCCCGATTTCAATATCTCACTTGATCCAGTGGGAATTGATCCCAATTTCCCTTTCAATACCCCAGGATTTTTCTCCTAA 1086 0.4337 MENDRSWEQNTLINELVQGMEVARKLKADLRTPYSVDTRDMMVQRILSSYEKALLILRWNVSTSELQGMSQATSTLLPESPISVNGSPLRKDIDGAIKDPEEVKHDSKKRKIIPKWVDQIRVSSESGLEGPYEDGYNWRKYGQKDILGTKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGLHTCSQGNNAVQPTKSPDKQERPQSHNNDIHHAQASQESLAKFRNILTVSTDKLGNEEMTYPFTFPSTSFGCMPRENHSLIPLPLENDSFLSSLFQAHLLSQTTPESNYFSSPTFQMNEFDGDYKKPRSESDITEIISTNTSATNSPIPDFNISLDPVGIDPNFPFNTPGFFS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3786g00076 361 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00076 361 MobiDBLite consensus disorder prediction 193 215 - -
Gabi3786g00076 361 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00076 361 FunFam WRKY transcription factor 53 118 195 - -
Gabi3786g00076 361 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00076 361 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 258 IPR044810 GO:0003700
Gabi3786g00076 361 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00076 361 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3786g00076 Gabi-Chr3786 597712 599489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3786g00076 7 353 WRKY Transcription Factor Family AT4G11070 37.644 1.07e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3786g00076 WRKY 2.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3786g00076 - - gmx:100815760 609.372