Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3786g00075 ATGGAGAATGACCGGAGCTGGGAGCAGAACACACTCATCAATGAGCTAGTTCAAGGGATGGAGGTAGCAAGGAAGTTGAAGGCAGACTTGAGGACACCATATTCAGTTGACACAAGGGATATGATGGTTCAGAGGATATTATCTTCTTATGAAAAAGCTTTACTAATTCTAAGATGGAATGTATCAACTTCCGAGTTGCAGGGCATGAGTCAAGCAACATCAACTTTGTTACCAGAGTCCCCAATATCTGTCAACGGAAGTCCTCTGAGGAAGGACATTGATGGGGCCATCAAGGATCCCGAGGAGGTTAAACACGATTCAAAGAAAAGAAAGATAATTCCCAAATGGGTGGATCAAATAAGAGTGAGCTCCGAGAGTGGCCTCGAAGGACCATATGAAGATGGCTACAACTGGAGAAAATATGGTCAGAAAGACATCCTCGGTACCAAATATCCCAGGTGCACCTTCCGCAACACTCAGGGCTGCTGGGCCACCAAGCAAGTACAGAGATCAGATGAAGATCCCACTATATTTGACATAACTTACAGAGGATTGCACACCTGTTCTCAGGGAAACAATGCCGTTCAGCCAACTAAATCACCGGACAAACAAGAGAGACCACAAAGTCATAATAATGATATTCACCATGCACAGGCATCACAAGAAAGCCTTGCAAAGTTCAGAAACATCTTGACTGTCAGTACGGATAAGCTGGGAAATGAAGAAATGACATATCCTTTCACTTTCCCTTCGACCTCATTTGGATGCATGCCACGAGAAAACCACAGCTTGATTCCTTTGCCCCTAGAGAATGATTCCTTCTTGAGCAGCCTTTTCCAAGCACACTTATTATCTCAAACAACACCGGAATCAAACTATTTCTCATCTCCAACTTTCCAGATGAATGAGTTTGATGGGGACTACAAGAAGCCACGTTCGGAATCTGATATTACTGAGATCATTTCCACCAACACATCAGCCACCAATTCTCCAATTCCCGATTTCAATATCTCACTTGATCCAGTGGGAATTGATCCCAATTTCCCTTTCAATACCCCAGGATTTTTCTCCTAA 1074 0.4358 MENDRSWEQNTLINELVQGMEVARKLKADLRTPYSVDTRDMMVQRILSSYEKALLILRWNVSTSELQGMSQATSTLLPESPISVNGSPLRKDIDGAIKDPEEVKHDSKKRKIIPKWVDQIRVSSESGLEGPYEDGYNWRKYGQKDILGTKYPRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGLHTCSQGNNAVQPTKSPDKQERPQSHNNDIHHAQASQESLAKFRNILTVSTDKLGNEEMTYPFTFPSTSFGCMPRENHSLIPLPLENDSFLSSLFQAHLLSQTTPESNYFSSPTFQMNEFDGDYKKPRSESDITEIISTNTSATNSPIPDFNISLDPVGIDPNFPFNTPGFFS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3786g00075 357 Pfam WRKY DNA -binding domain 133 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00075 357 Gene3D WRKY domain 118 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00075 357 MobiDBLite consensus disorder prediction 189 211 - -
Gabi3786g00075 357 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 254 IPR044810 GO:0003700
Gabi3786g00075 357 FunFam WRKY transcription factor 53 118 191 - -
Gabi3786g00075 357 ProSiteProfiles WRKY domain profile. 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00075 357 SUPERFAMILY WRKY DNA-binding domain 131 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00075 357 SMART WRKY_cls 132 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3786g00075 Gabi-Chr3786 597712 599489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3786g00075 7 349 WRKY Transcription Factor Family AT4G11070 36.494 6.14e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3786g00075 WRKY 4.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3786g00075 - - gmx:100815760 594.734