Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3786g00064 ATGGCTGCACCTTCCATCAAGCACACTCACCACCTCAACCGCACCAAACTGGTCACTAGACCAGTCGAAGAATCCCCAATGAAGCATTCGTATCCTAGACTCGTACGAATACGTGTCACCGACGGTGATGCCACGGACTCCTCCAGCGACGACGAAGAAGAAGCCTCCACGCGCCGCCGAGTGAAAAACTTTGTAAACGAGATTACTTTTGACTCCTGCTCCGGCGACAACGAAGGCATTAACGTTGTTTCTAGGAAAAGAAGCAGGGGTAGGACCGTGTCCAGAACTCCCGGCGGCGGCAAAAGAGGAGCTCCGGCGAGTCGGCGAGTGTGCTCCGGCAAGAAATTCCGGGGAGTGAGACAGAGGCCTTGGGGGAAGTGGGCGGCGGAGATAAGGGACCCTTCGCGGCGCGTGCGGTTGTGGTTGGGGACCTACGATACTGCTGAAGAAGCTGCCATTGTGTATGACAACGCCGCCATTCAGCTTCGTGGTGCCGACGCGCTCACCAATTTCATAATGCCGCCGGCGGAGAACATAGACAACGGCGAAGGTTCTCGAAACAACAGCTTGCTTTCTCCGACTTCGGTTCTTCAGTGTTGTTCGTTATCGGAGGAAGTTGAGTCTGTAACCGCCAGAGACGATGTTGTCGATATTCCTACGAGTGAATCTCGCGATGAATGCGAATATTCATGCGTGTCGGGGAATTCCTCTGATGAGTTCAAATCCGAGTCAATGTTTCCTATTCCAAGCGATATGCTATTTGATTTCCAAAGCACGTTTCCCGCACCAGAAAGCATTTTCTTCGCCGATGATTTTCCTGAAATCTTCGTAACTTCTAGCGACAGTTTCGATTTCAGTTTCACAAATTGGCATATGGATGATGATAATTTCAAAGATATTGGGGATTTGTTTGTTTCGGATCCCCTTGTCGCTCTTTGA 939 0.5091 MAAPSIKHTHHLNRTKLVTRPVEESPMKHSYPRLVRIRVTDGDATDSSSDDEEEASTRRRVKNFVNEITFDSCSGDNEGINVVSRKRSRGRTVSRTPGGGKRGAPASRRVCSGKKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAAIVYDNAAIQLRGADALTNFIMPPAENIDNGEGSRNNSLLSPTSVLQCCSLSEEVESVTARDDVVDIPTSESRDECEYSCVSGNSSDEFKSESMFPIPSDMLFDFQSTFPAPESIFFADDFPEIFVTSSDSFDFSFTNWHMDDDNFKDIGDLFVSDPLVAL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3786g00064 312 Gene3D AP2/ERF domain 114 173 IPR036955 GO:0003700|GO:0006355
Gabi3786g00064 312 MobiDBLite consensus disorder prediction 1 58 - -
Gabi3786g00064 312 Pfam AP2 domain 115 164 IPR001471 GO:0003700|GO:0006355
Gabi3786g00064 312 SUPERFAMILY DNA-binding domain 115 172 IPR016177 GO:0003677
Gabi3786g00064 312 ProSiteProfiles AP2/ERF domain profile. 115 172 IPR001471 GO:0003700|GO:0006355
Gabi3786g00064 312 CDD AP2 114 171 IPR001471 GO:0003700|GO:0006355
Gabi3786g00064 312 PRINTS Ethylene responsive element binding protein signature 116 127 IPR001471 GO:0003700|GO:0006355
Gabi3786g00064 312 PRINTS Ethylene responsive element binding protein signature 138 154 IPR001471 GO:0003700|GO:0006355
Gabi3786g00064 312 FunFam Ethylene-responsive transcription factor 2 114 173 - -
Gabi3786g00064 312 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 32 229 - -
Gabi3786g00064 312 MobiDBLite consensus disorder prediction 84 109 - -
Gabi3786g00064 312 SMART rav1_2 115 178 IPR001471 GO:0003700|GO:0006355
Gabi3786g00064 312 MobiDBLite consensus disorder prediction 16 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3786g00064 Gabi-Chr3786 500393 501331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3786g00064 1 312 AP2-EREBP Transcription Factor Family AT4G23750 38.920 2.91e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi3786g00064 AP2 2.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3786g00064 - - gmx:100813992 327.405