Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3786g00062 ATGAACGATTCCGATGTCTCCAAACAAATCCAGCAGATGGTGAGGTTTATACGCCAGGAAGCTGAGGAAAAAGCCAACGAGATCTCTGTCTCTGCCGAAGAAGAATTCAATATCGAGAAGCTGCAGTTGTTCGAAGCCGAGAAGAAGAAGATCAGGCAAGAATACGAGCGCAAACAGCGCCAAGTTGAAGTTCGGAAGAAGATTGAGTACTCAATGCAGCTGAACGCTTCTCGGATTAAAGTTCTTCAAGCTCAGGATGACATGATTAATTCCATGAAAGAAGCTGCATCCAAGGAACTTCTGAATGTGCATCATCATCATCATGTGTACAGAAACCTTATTAAAGATCTCATTGTTCAGAGTTTGCTAAGACTGCAAGAACCTTCTGTCTTATTGAGATGTCGGAAACATGACCTGCACGTGGTAGAGCATGTGCTGGATTCAGCTGCACAGGAGTATGCTGATAAAGCAAATGTGGATCCTCCGGAGATCCTTGTTGACAAAAAGGTCTATCTTCCACCTGCACCCAGCCATCATCATGCCCATGATCCCTACTGTTCTCTGGCGGGGTGGTGTTGGCTTCTCGAGATGGAAAGATTGTTTGTGAAAACACTCTTGATGCCAGACTGGATGTAG 636 0.4513 MNDSDVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLFEAEKKKIRQEYERKQRQVEVRKKIEYSMQLNASRIKVLQAQDDMINSMKEAASKELLNVHHHHHVYRNLIKDLIVQSLLRLQEPSVLLRCRKHDLHVVEHVLDSAAQEYADKANVDPPEILVDKKVYLPPAPSHHHAHDPYCSLAGWCWLLEMERLFVKTLLMPDWM 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3786g00062 211 SUPERFAMILY V-type ATPase subunit E-like 87 160 - -
Gabi3786g00062 211 Gene3D - 1 62 - -
Gabi3786g00062 211 Coils Coil 41 61 - -
Gabi3786g00062 211 Gene3D - 92 184 IPR038495 -
Gabi3786g00062 211 Pfam ATP synthase (E/31 kDa) subunit 16 172 IPR002842 GO:0033178|GO:0046961|GO:1902600
Gabi3786g00062 211 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 187 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3786g00062 Gabi-Chr3786 462968 466179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3786g00062 1 187 Primary Pumps ATPases(2) AT4G11150 71.123 8.43e-95 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3786g00062 K02150 - qsa:O6P43_021011 318.161