Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3786g00013 ATGGATGAGCTTGCGTGCTTGATGGACTGGGATTTGGAAGCTATTGTGAGAGGATGCACCGGTGAAGCCTCAGCTAACACCATGATCGATGAACCTCATCCTAATTTTTCTCTTTTTTGTTCTGAACAAGATGAGCTACTTGGCACTTTTCCTCAATTCTCAGAAACCACCAAGGTCCATGATGAATTGGAAGAACTTTACAAACCTTTCTGTCCAGTTTTGCACCCTCTTTCCTCACAGACCATCGTTACAAATTCCCTACCTATCCCCAAAGAAACCGAAGAAGTCAAAGTACTTAAAGCATCAGAGAAAGTAGCTCTACAAGATTTGCAAGTTCCAGCAGTATCTAAATGTAAAAGAAGCAAGAAGAACCAAGTGAAGAGGGTGGTGAAGCAGGTGACAGCAGCAGATGGTGTTTGTGATGCGTGGGCATGGCGTAAATATGGACAGAAACCAATAAAGGGTTCACCTTATCCTCGAAGTTACTATAGATGCAGCAGTTCCAAAGGATGCTTGGCGAGGAAACAAGTTGAAAGGAGCAATTTGGATCCAGGACTTTTTCTGGTTACCTACACAGCAGAACATAGTCATCCTCACCCAACTCGTAGAAACTCACTAGCAGGGATCACTCGAAAGAACAATTCATCAATAGTTGCACCTATAAGCACTCTTGACCAAAGGACTTGTTCTTCAAATTCCTTAACAACAATTCACTCTCCAAGTACACCTTTGGTGGGGGCGACGTCATCCAATATTGAAGATGAGATTGTGACAAGTGTGCAACAAAGTAAGGGCTTGAAGAAAGAGGAAGATTTTCTTGATTGGTTGGATGATGCTGAAGGTGCTCAATTATGTGATGGTTGGATTCCAAGCGCAGAGTTAGAGGAACTGATAGGATTTAAGTGCCAACAACTTGAATTAGATGGAAGCAGTTTCATGGATGGTTTTGTTGACACTTTGTTCCTTAATGATTCTAATAAGTAG 984 0.4207 MDELACLMDWDLEAIVRGCTGEASANTMIDEPHPNFSLFCSEQDELLGTFPQFSETTKVHDELEELYKPFCPVLHPLSSQTIVTNSLPIPKETEEVKVLKASEKVALQDLQVPAVSKCKRSKKNQVKRVVKQVTAADGVCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSNLDPGLFLVTYTAEHSHPHPTRRNSLAGITRKNNSSIVAPISTLDQRTCSSNSLTTIHSPSTPLVGATSSNIEDEIVTSVQQSKGLKKEEDFLDWLDDAEGAQLCDGWIPSAELEELIGFKCQQLELDGSSFMDGFVDTLFLNDSNK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3786g00013 327 FunFam WRKY transcription factor 22 122 193 - -
Gabi3786g00013 327 ProSiteProfiles WRKY domain profile. 134 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00013 327 SUPERFAMILY WRKY DNA-binding domain 136 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00013 327 Gene3D WRKY domain 122 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00013 327 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 263 IPR044810 GO:0003700
Gabi3786g00013 327 SMART WRKY_cls 139 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3786g00013 327 Pfam WRKY DNA -binding domain 141 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3786g00013 Gabi-Chr3786 189876 191139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3786g00013 1 265 WRKY Transcription Factor Family AT4G23550 43.165 2.69e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3786g00013 WRKY 2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3786g00013 K13426 - gmx:102663255 370.163