Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3786g00005 ATGGCCACGAAAGAGTCAAGTTCTGCTGCTTCTGCTTCTGCTTCTGCTTCAGGGGATGCTAAAATCAAAAGGGTTCTCACTCATGGTGGTCGATATGCACAGTACAATGTGTACGGAAACTTGTTCGAGGTGTCCTCCAAATACGTACCTCCCATTCGCCCCATCGGCAGAGGGGCTTATGGCATCGTCTGTGCTGCTGTTAATTCCGATACACACGAACAAGTTGCCATCAAGAAGATCGGAAATGCATTTGACAATATAATTGATGCTAAAAGGACATTGAGAGAAATCAAGCTCCTTCGTCACATGGACCATAAAAATATCATTGCTATTAAGGATATCATACGACCTCCCAAAAAGGAGACCTTTAATGATGTATACATTGTTTATGAATTGATGGACACTGATCTTCATCATATAATTCATTCTGACCATCCTCTTAATGAAGAACATTGTCAGTATTTCTTATATCAGCTGTTACGGGGGCTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGATCTTAAGCCCAGTAATTTACTAATGAATGCAAACTGTGACCTTAAAATCGGGGACTTCGGTATGGCAAGGACAACATCTGAAACGGATTTCATGACAGAGTATGTTGTCACACGATGGTATCGAGCCCCAGAATTGCTACTTAATTGTTCTGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGTTGCATTCTTGGTGAAATCATGACCAGAGAACCCTTGTTTCCTGGGAAAGACTATGTTCATCAACTAAGGCTTATAACAGAGTTAATAGGTTCACCTGACGATGCCAGCCTTGGATTTCTCCGAAGTGATAATGCCAGAAGATATATTCGACAGCTTCCACAATACCGGAAGCAAAAATTCTCGGCTAGATTCCCTAACATGTTGCCTGAGGCACTGGATCTGTTAGAAAAGATGCTTATCTTTGATCCAAACAAGCGCATTACAGCTGAAGAAGCACTATGTCACCCATATCTTTCATCACTCCATAACATCAATGAGGAGCCAGTTTGTCCCAGGCCTTTCAGTTTTGATTTTGATCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATATGGAAGGAATCAGTGAAGTTCAATCCAGATCCACCCTGTCAGTAA 1152 0.421 MATKESSSAASASASASGDAKIKRVLTHGGRYAQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSDTHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHKNIIAIKDIIRPPKKETFNDVYIVYELMDTDLHHIIHSDHPLNEEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGMARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYIRQLPQYRKQKFSARFPNMLPEALDLLEKMLIFDPNKRITAEEALCHPYLSSLHNINEEPVCPRPFSFDFDQPTCTEEHIKELIWKESVKFNPDPPCQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3786g00005 383 Gene3D Transferase(Phosphotransferase) domain 1 133 362 - -
Gabi3786g00005 383 Gene3D Phosphorylase Kinase; domain 1 32 372 - -
Gabi3786g00005 383 ProSitePatterns MAP kinase signature. 84 187 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gabi3786g00005 383 FunFam Mitogen-activated protein kinase 133 362 - -
Gabi3786g00005 383 ProSiteProfiles Protein kinase domain profile. 49 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3786g00005 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 47 337 - -
Gabi3786g00005 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Gabi3786g00005 383 ProSitePatterns Protein kinases ATP-binding region signature. 55 79 IPR017441 GO:0005524
Gabi3786g00005 383 FunFam Mitogen-activated protein kinase 34 144 - -
Gabi3786g00005 383 SMART serkin_6 49 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3786g00005 383 CDD STKc_TEY_MAPK 42 378 - -
Gabi3786g00005 383 SUPERFAMILY Protein kinase-like (PK-like) 52 342 IPR011009 -
Gabi3786g00005 383 Pfam Protein kinase domain 53 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3786g00005 Gabi-Chr3786 57353 62245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3786g00005 8 378 MAP Kinase Gene Family AT4G01370 80.863 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gabi3786g00005 Pkinase 4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3786g00005 - - gmx:100807109 735.717