Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3786g00004 ATGAAATCATTTGAGTACGTCGCTCACCTAAAAGGTGAAGACCCTTTTGTTCAAGTTTCAACATTGAACATGGCCACGAAAGAGTCAAGTTCTGCTGCTTCTGCTTCTGCTTCTGCTTCAGGGGATGCTAAAATCAAAAGGGTTCTCACTCATGGTGGTCGATATGCACAGTACAATGTGTACGGAAACTTGTTCGAGGTGTCCTCCAAATACGTACCTCCCATTCGCCCCATCGGCAGAGGGGCTTATGGCATCGTCTGTGCTGCTGTTAATTCCGATACACACGAACAAGTTGCCATCAAGAAGATCGGAAATGCATTTGACAATATAATTGATGCTAAAAGGACATTGAGAGAAATCAAGCTCCTTCGTCACATGGACCATAAAAATATCATTGCTATTAAGGATATCATACGACCTCCCAAAAAGGAGACCTTTAATGATGTATACATTGTTTATGAATTGATGGACACTGATCTTCATCATATAATTCATTCTGACCATCCTCTTAATGAAGAACATTGTCAGTATTTCTTATATCAGCTGTTACGGGGGCTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGATCTTAAGCCCAGTAATTTACTAATGAATGCAAACTGTGACCTTAAAATCGGGGACTTCGGTATGGCAAGGACAACATCTGAAACGGATTTCATGACAGAGTATGTTGTCACACGATGGTATCGAGCCCCAGAATTGCTACTTAATTGTTCTGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGTTGCATTCTTGGTGAAATCATGACCAGAGAACCCTTGTTTCCTGGGAAAGACTATGTTCATCAACTAAGGCTTATAACAGAGTTAATAGGTTCACCTGACGATGCCAGCCTTGGATTTCTCCGAAGTGATAATGCCAGAAGATATATTCGACAGCTTCCACAATACCGGAAGCAAAAATTCTCGGCTAGATTCCCTAACATGTTGCCTGAGGCACTGGATCTGTTAGAAAAGATGCTTATCTTTGATCCAAACAAGCGCATTACAGCTGAAGAAGCACTATGTCACCCATATCTTTCATCACTCCATAACATCAATGAGGAGCCAGTTTGTCCCAGGCCTTTCAGTTTTGATTTTGATCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATATGGAAGGAATCAGTGAAGTTCAATCCAGATCCACCCTGTCAGTAA 1221 0.4185 MKSFEYVAHLKGEDPFVQVSTLNMATKESSSAASASASASGDAKIKRVLTHGGRYAQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSDTHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHKNIIAIKDIIRPPKKETFNDVYIVYELMDTDLHHIIHSDHPLNEEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGMARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYIRQLPQYRKQKFSARFPNMLPEALDLLEKMLIFDPNKRITAEEALCHPYLSSLHNINEEPVCPRPFSFDFDQPTCTEEHIKELIWKESVKFNPDPPCQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3786g00004 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Gabi3786g00004 406 Gene3D Transferase(Phosphotransferase) domain 1 156 385 - -
Gabi3786g00004 406 ProSiteProfiles Protein kinase domain profile. 72 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3786g00004 406 Gene3D Phosphorylase Kinase; domain 1 55 395 - -
Gabi3786g00004 406 SMART serkin_6 72 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3786g00004 406 Pfam Protein kinase domain 76 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3786g00004 406 SUPERFAMILY Protein kinase-like (PK-like) 75 365 IPR011009 -
Gabi3786g00004 406 FunFam Mitogen-activated protein kinase 57 167 - -
Gabi3786g00004 406 ProSitePatterns MAP kinase signature. 107 210 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gabi3786g00004 406 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 70 360 - -
Gabi3786g00004 406 ProSitePatterns Protein kinases ATP-binding region signature. 78 102 IPR017441 GO:0005524
Gabi3786g00004 406 CDD STKc_TEY_MAPK 65 401 - -
Gabi3786g00004 406 FunFam Mitogen-activated protein kinase 156 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3786g00004 Gabi-Chr3786 57353 62366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3786g00004 31 401 MAP Kinase Gene Family AT4G01370 80.863 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gabi3786g00004 Pkinase 4.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3786g00004 - - tpra:123916746 747.273