Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3785g00001 ATGAGCACCAAAGCTAGCACTCTCAACCTCACCTCTGGCTACTCCTCCTACTCCGGCACGGCTGCTGCCACCGGAAACTTGTTTTCCCTTGGCCTCTTCCTCTTGCAACATATCCAAATCCCTGATATCATCATTGCAGCCATGGTTTTCATAACCATCCATTCTTTGAGGTCAAAGAAGCATCACGGCCTACCTATTTGGCCTGTCCTTGGAATGTTACCTTCTTTGGTCACAGCACTCAAAACTGACAATATGTATGAATGGATCACAGATATACTCAACCATCAAAATGGGACATTTAGATTCAAAGGGCCTTGGTTCACAAGCCTTAATGGCATCATCACCTCTGATCCTCGCAACATGGAGCATCTTCTCAAAACAAAGTTCCATGTTTTCCCTAAAGGAAAGTTCTTCAGGGACACAGTTTGTGACCTACTTGGAGATGGTATATTCAGTGCAGATGATGAGACATGGCAAAGACAAAGGAAAACAGCAAGCATTGAATTTCACTCCACAAAGTTCAGGAAACTAACAACTGAGTCACTCTTTGAGCTTGTCCATAACAGGCTAATACCTGTCTTAGAGGAATCTGTTAAGAAATCTCTTACCATAGATCTTCAAGATATCTTGTTAAGGCTCACTTTTGATAATGTATGCATGATAGCCTTTGGTGTTGATCCTGGTTGTTCACAACCTCATTTGCCTGAAATACCATTTGCCACAGCCTTTGAGGATGCAACAGAAGCCACTGTGCATCGATTTGTCACACCTGAGTTTATGTGGAAGGCCATGAGGTTTCTCAACTTGGGCATGGAGAGAAAGCTGAAGGAATCAATAGAAAAAGTTGATGAATTTGCTGAGAATGTTATTAGGACTAGAAAGAAGGAGCTCTCTTTGCAAAGTGAAGACAAGAACACAAAATCAGACTTGTTAACAGTGTTTATGAGACTCAAGGATGAGAATGGACAACCATATTCAGATAAGTTCTTGAGGGATATATGTGTGAATTTCATATTAGCAGGGAGGGACACTTCTTCAGTTGCTTTGAGCTGGTTTTTCTGGTTGCTTGATCAAAATCCTGTAGTGGAGGAGAGAATACTAGAAGAGATTTGCAGGGTGGTGAGTCAGAGGGAGGAAATCAACAAGGAACTATTTGATAATTCTTTGACCTTTAGGCCTGAGGAGATAAAGAAGATGGATTATTTGCATGCTGCTCTTTCAGAAGCTCTGAGGTTATATCCTTCTGTTCCTGTTGATCACAAGGAGGTAGTGGAAGATGACACATTCCCAGATGGAACTCTACTAAAGAAGGGGACGAAAGTGATGTATGCAATTTATGCAATGGGAAGAATGGAAAATATATGGGGCAAGAACTGTAGAGAATTCATGCCAGAAAGATGGTTAAGAGATGGTCACTTCATTAGTGAATCTGCTTACAAATTCACTGCTTTCAATGGAGGACCTCGTTTGTGTTTAGGCAAAGATTTTGCATACTATCAGATGAAATATGCTGCAGCCAGCATCATATACCGCTACCATGTGAAAGTGGTAGAGAATCACCCTGTTGTGCCAAAGCTTGCTTTAACTCTCTACATGAAACATGGATTGAAAGTTAACCTTCACAAGCGTCATGCAGCAAAAATTCAAAAATACTTTAATGATGGATACCATGCTTTAAAGTGA 1683 0.4106 MSTKASTLNLTSGYSSYSGTAAATGNLFSLGLFLLQHIQIPDIIIAAMVFITIHSLRSKKHHGLPIWPVLGMLPSLVTALKTDNMYEWITDILNHQNGTFRFKGPWFTSLNGIITSDPRNMEHLLKTKFHVFPKGKFFRDTVCDLLGDGIFSADDETWQRQRKTASIEFHSTKFRKLTTESLFELVHNRLIPVLEESVKKSLTIDLQDILLRLTFDNVCMIAFGVDPGCSQPHLPEIPFATAFEDATEATVHRFVTPEFMWKAMRFLNLGMERKLKESIEKVDEFAENVIRTRKKELSLQSEDKNTKSDLLTVFMRLKDENGQPYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPVVEERILEEICRVVSQREEINKELFDNSLTFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDDTFPDGTLLKKGTKVMYAIYAMGRMENIWGKNCREFMPERWLRDGHFISESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYHVKVVENHPVVPKLALTLYMKHGLKVNLHKRHAAKIQKYFNDGYHALK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3785g00001 560 CDD CYP86A 100 536 - -
Gabi3785g00001 560 PRINTS E-class P450 group I signature 481 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3785g00001 560 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3785g00001 560 PRINTS E-class P450 group I signature 403 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3785g00001 560 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3785g00001 560 PRINTS E-class P450 group I signature 491 514 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3785g00001 560 PRINTS P450 superfamily signature 491 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3785g00001 560 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3785g00001 560 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3785g00001 560 PRINTS P450 superfamily signature 482 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3785g00001 560 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 484 493 IPR017972 GO:0005506|GO:0016705
Gabi3785g00001 560 Gene3D Cytochrome P450 58 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3785g00001 560 Pfam Cytochrome P450 65 528 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3785g00001 560 FunFam Cytochrome P450 55 546 - -
Gabi3785g00001 560 PANTHER CYTOCHROME P450 55 538 - -
Gabi3785g00001 560 SUPERFAMILY Cytochrome P450 63 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3785g00001 Gabi-Chr3785 19334 21607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3785g00001 27 556 Cytochrome P450 AT5G23190 71.215 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3785g00001 K15402 - gmx:100809503 878.626