Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3784g00003 ATGGTTGATGCTGAGGTTCCTGATGTTGCTCCACATGCAGACATGGTTGAGCCCGAGGTGGAGGATGATGATGACGAGGATGATGAGACTGACTTGCAGGATATAGCTGAGCTTGAGGGTGGGTTTTCATTGCGTGATGTCATGAAGGGCATATGCGCCACGCTGAAGAAGATAGGAAAAATGGCGCTGAAACATAAAAATTGGAGGAAGAGTCACATCCAGAAAGGGAATGAAAGAAAACCCTACAAACCCCGTTTTTCTTTACCTAAATCAATACCATGCAAGCACTACAATGGTGTTTTAAGCTCTTCCTCACTTGACAAGAGGTTACTATCAGCACCAAGCAATGCCTCAGAACTTGAGATGAACTTTGAAAAGTTATCAGATCATCGTGAGTTGGTGTTACCTAGCCAGTTTTATCCACATGTTAGTGGCATTATAGATGATGGATATTTCAAAGGTTTGGAATCAAGAGTTAAGGGGTGTGGCTACTTTAGCCTTAAGATGATTCATGATGCTACAAATGGATTGGCTAAAGAAAATGTTATTGGAAGTGGGGATAATGGGACTGTTTATCTTGGTTTGTTGCCAAATCATAGGCGTGTGGCAGTTAAGAAGTTAGTGTGTGTAAGTCCCCAACCTGAGGAATTTTTTGCATCACGAATTGAGGCAATTGGACGTGTAAAGCACAAGAAGCTGGTGAAATTGCTTGGATATTGTACTGAGGGAGCTTACAGGATGTCAGTATCTGAATATATAGAAAATGGAAATCTACATCATTGGCTTCATGAATTTCCTGGACAAATCAGCCCTCTAACTTGGACTAGAAGATTAAACATTATCCATGGTGTGGCAAAAGGATTGGTTTACCTTCATGAAGAAGTTGAACCCAAGATTCTCCATGGCAGAATAAAATCCAGCAATATATTGCTGGACCACCAATGGAATCCAAAGATCTCTGATTTTGGCCTTGCAAAGCTCCTCAATCCTGAATGGAGTCACATTATAATGGAAGCATTGGGTTATGTAGCTCCACAATGTCATTCCACTAGTACCTTCACTGAGGGTGATGACATTTACGATTTTGGATTACTTATCATGGAGATTTTATCAGGGAGGACTCCTTTAGATCATAGTGAACCCCAGGATTCTATAGTAGACTGGTTCAAATCAATGATTTCCAATGGAAAGATTGCTAATGTGTTGGATCCAAAATTGCTTGCAAGGCCTTCTTCCAAGGAACTTAAACGAGTTATTTTGGTTGCTCTAAGATGTGTTGATCCTGATGTGAATCCTAGAATCAAAATGGGAGATGTTGCTCGCATGCTTGAGACCAACCTACTTCTTTTTGAAGAACATCAAATTGCAACGGAGTCTTGTGAGCACAATCACTCTCCACAAAGTCAGCAAGATTAG 1416 0.4089 MVDAEVPDVAPHADMVEPEVEDDDDEDDETDLQDIAELEGGFSLRDVMKGICATLKKIGKMALKHKNWRKSHIQKGNERKPYKPRFSLPKSIPCKHYNGVLSSSSLDKRLLSAPSNASELEMNFEKLSDHRELVLPSQFYPHVSGIIDDGYFKGLESRVKGCGYFSLKMIHDATNGLAKENVIGSGDNGTVYLGLLPNHRRVAVKKLVCVSPQPEEFFASRIEAIGRVKHKKLVKLLGYCTEGAYRMSVSEYIENGNLHHWLHEFPGQISPLTWTRRLNIIHGVAKGLVYLHEEVEPKILHGRIKSSNILLDHQWNPKISDFGLAKLLNPEWSHIIMEALGYVAPQCHSTSTFTEGDDIYDFGLLIMEILSGRTPLDHSEPQDSIVDWFKSMISNGKIANVLDPKLLARPSSKELKRVILVALRCVDPDVNPRIKMGDVARMLETNLLLFEEHQIATESCEHNHSPQSQQD 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3784g00003 471 ProSiteProfiles Protein kinase domain profile. 177 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3784g00003 471 SUPERFAMILY Protein kinase-like (PK-like) 161 444 IPR011009 -
Gabi3784g00003 471 Gene3D Transferase(Phosphotransferase) domain 1 253 462 - -
Gabi3784g00003 471 ProSitePatterns Protein kinases ATP-binding region signature. 183 206 IPR017441 GO:0005524
Gabi3784g00003 471 Pfam Protein kinase domain 179 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3784g00003 471 Gene3D Phosphorylase Kinase; domain 1 153 252 - -
Gabi3784g00003 471 FunFam Putative receptor-like serine/threonine-protein kinase 253 458 - -
Gabi3784g00003 471 PANTHER OS01G0323000 PROTEIN 162 462 - -
Gabi3784g00003 471 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3784g00003 Gabi-Chr3784 21315 27176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3784g00003 161 443 Receptor kinase-like Gene Family AT3G58690 37.543 2.06e-60 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gabi3784g00003 Pkinase 9.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3784g00003 - - aprc:113866630 533.872