Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3777g00001 ATGAGGTCTCTTAGTCTGATAGCGACAGCTATTTGCTGTGTAGTGGTTGTGCTTGGAGGACTACCCATCTCCTCAGATGCACAGCTAGATCCCTCGTTTTACTTGAAAACTTGTCCTCAGGTTCATTCAATTGTTGTTGGAATTTTAAGTGGTGTTTCTACAAAAGATCCACGTATGCTTGCAAGTCTCGTCAGGCTTCACTTTCATGACTGTTTTGTTCAAGGCTGTGATGCATCAATTTTGTTGAACAACACTGCTACGATAGTGAGCGAGCAACAAGCATTGCCAAATAACAACTCAATAAGGGGTTTGGATGTTGTGAACCAAATTAAGACAGCGGTGGAAAATTCTTGTCCCGGCGTAGTTTCTTGCGCTGATATTCTTGCCCTTGCTGCTTCAGTATCTTCTGCTCTGGCTCAAGGTCCTTTTTGGGTAGTTCCATTGGGAAGAAGGGATAGTTTAACAGCCAACCGAACCCTTGCAAATCAAAACCTTCCAGCTCCTTTCTTCAACCTAACTACACTTAAATCCTCCTTTGCTGTTCAAGGTCTCGACACTAATGATCTAGTTACACTCTCAG 580 0.4328 MRSLSLIATAICCVVVVLGGLPISSDAQLDPSFYLKTCPQVHSIVVGILSGVSTKDPRMLASLVRLHFHDCFVQGCDASILLNNTATIVSEQQALPNNNSIRGLDVVNQIKTAVENSCPGVVSCADILALAASVSSALAQGPFWVVPLGRRDSLTANRTLANQNLPAPFFNLTTLKSSFAVQGLDTNDLVTLS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3777g00001 193 FunFam Peroxidase 32 177 - -
Gabi3777g00001 193 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 PRINTS Haem peroxidase superfamily signature 188 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 Gene3D - 32 165 - -
Gabi3777g00001 193 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 PRINTS Plant peroxidase signature 187 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 PANTHER PEROXIDASE 72-RELATED 26 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 Pfam Peroxidase 53 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 Gene3D Peroxidase, domain 2 166 193 - -
Gabi3777g00001 193 ProSiteProfiles Plant heme peroxidase family profile. 28 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3777g00001 193 SUPERFAMILY Heme-dependent peroxidases 28 193 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3777g00001 Gabi-Chr3777 3773 6266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3777g00001 24 193 Peroxidase AT2G38380 56.725 2.43e-63 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3777g00001 K00430 - gmx:547499 297.36