Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi376g00012 ATGGAGATCGAGAAAAGACGTTCCAAGGGAAGCTTCCTCAGCTTCTTTGATTGGAATGGGAAATCTCAAAAGAAGCTGTTTTGTGACAATCCCAACTTACCTGTCTTTCTCTCTAGTGAATGTGATGTTCCTATTCTAAGCACTTCTGCTACGTTAATTGTAGAAGTTTCAAAGCAAGGAAAGGAAAACATGGACAAAATGCCAATGTCACAGGACAAAAGGATAAAGATGGATGATAGTGGAGCAAATGCTAGTAATATTGTAAGTCGTGATTTTAACTGTGCCTTATCAACTAGTAGTGATGAAGGGTGTGGGACTAAAGCCCCAGGGTTAGTAGCCAGACTCATGGGTTTGGATTCATTGCCAGTTTCAACAGTGTCTGAGCTCTCCTCCACTTCATTATGTGGCTCCAACTCTCTTGGATCTTCTCATTGTCATGAGGGTGCTCTTCATTCAGTGGCTGATTATTTCCCTGTGGATTCCATAACTATGCCACTTAAGCCAGAGAAGTCTTCTTGGGGTTCCAGGGAATCAAAGGCTCAGAAAGTGGTAAACCTGTCAATAAAGAGATTTCAAGCTGAAATGTTGCCTCCAAAGTCTGCTAAACCCATTCCAGTTACTCACAACAAACTTTTGTCTCCTATCAAGAACCCTGGCTATATACAACCTAAGAGTGCAGCTCATACTATAGAGGCAGCTGCTAAGATAATTGAGGCAAGTCACCAGCCATATATGAGGAATAGAATGTCTTCGGTTGGATCTTTATTTGTTCCATTAAGAATTCTTGATCTGAAAGAGAAATTGGAAGCTGCGCAATATGAATCCAAGCTCATCGGTCTGCACACGACTAACCCTGTGAATGGCAAGCTTAGTGAGAAGAGGAACAACTTATATAAATCCACTCCATCAGAAAAAAATAGTTCTCGCCATTTAGCAAGTAAAGGAAAATCTGCTTCGCTTGCAATACCATCCAAAGCCAATGTTCAGAACAGAGATATGCCGACTTTGAATGGTAATAGGGAATGTATGAAACAGAATGAGAAAAAATCAAACCAATTATCCAGGAGCCAGAAGAAACAAATTACAGACCGGGCCAGGGTCGTGCAACAGAGAGCTTGTACTGGCCAGAATAGCAATGAACTTGGGCAGAATAATCAAAAGCTGAATAGTGTAACCACCAAATGTAAATCCACTTCAAAAGTGAACTCCAATAAGCCAACACGAACTTGGTCTTCAGAAAGTTCAGCTGGTTCAAGGAAGAAAACAAACAAGGGTGCTGTAAATGCCAACATTGAGCCCAAAAGGTCAAGCACAAGGGTAAGTGATACCCAAAAGGAGTTTCCAGTATCCAAAAAAAAGAGTATTTCCCAAATGAAAAGGTATATTCATAGTGATGTTCAGAATGAGGCAAAAGGTTCTGATGATGCAGTTAATAGTTATGAAAGCAAGTCCATAAAATGCAATATTACAACTGATGGAAATATTGACCAGGATGCATTTAGCATGAAAGAAAACAAGGATGTGATTTCATTTACATTTACGTCTCCCTTGAGGAGAAACATACCTGAGTCACAGTCCTCTACTGAGCAAGTGATGGGAACAAGGAACAGAATTAATGTCAATTCTTATGGTCATATTGATAAGCTTTCTCCCAAAAAATTGTCATTATCTCCTTCTACGTTACATGTGATAGATGGTGATGCTTTAAGTGCCCTTCTGGAGAAAAAGCTGCAAGAATTGACATCTAAAATTAACCCACCTCAATGTGCCTTGGCCACAGAAGGGTCTTCCGTTGGTTTAAGATCTAGTTTAGAAGACAAAAGGGAACAAGACAGAAGCTTTCACCCCAACCTGCTTAGTAATAAATTGGACAGCATGCATGACAATTGTTGTTCTTCAAGTGATAATTTTGTGCTTAACATGAATCATCAACTGCAGTCATCAGAACCAATGGAAGAGCCTAGCTGTAGCAGCGATAGTGAAAGCGGAAATGGTCTAAGTTGTCTCCACAAAAGAGCTGTTACAGTTTTTGAAAATAATTTTTTCAGTGAAAGTTACTTGGATAGTGAAGATAGTATATACGGCAGCACAGTTTATTCTTCCATGCAAGATGAAGAAGTATCTGATTTTTCTCCAATAAATGAATCTTTGTCACTTGAAACTGACATGAAATTGTCTGAGCAAAACTCTTACACGGAGGTGAGAGGTAACATGGCTATCCAACAATTAAGTGTAATGCCAAATTCGGGCAATTTTACAAGATCAACAAGGAACATGGAACTTGAATATATAAAGGATATACTCAGCAATGCAGAGTTGATGGTAGAAGAATTCGTGGTGTGTCAGACAGATAAGATCATAATGCCAAATCTCTTTGATCTGTTGGAGAATCAGAGAAATGGGGCAGAAAACTATGAAGAGTATTCTAAGCTTGAGAGGAAGGCTATATTTGACTGTGTAAGTAATTGCCTAGAATTAAGATGTAGGCAAGTTTTTGTTGGAAGCTGCAAAGCATGGCCTAAATGGGCAGCATCAGTTCAGAGGAAGAACTGGTTAGCAGAAGAATTGTACAAGGAGATACTGGGCTTTAGAAGCATGGAAGAAGAGGTGATGGTGGACAAGCTTGTCAACAAGGACATGAGTATTCCATGGGGTAGATGGCTTGACTTTGACATTGAAGCCTTTGAAGAGGGTTTAGAACTTGAACTTGACATAGTAACTAACTTGATTAACGAATTAGTTTTTGATTTGTTACTTGTTTAA 2763 0.3938 MEIEKRRSKGSFLSFFDWNGKSQKKLFCDNPNLPVFLSSECDVPILSTSATLIVEVSKQGKENMDKMPMSQDKRIKMDDSGANASNIVSRDFNCALSTSSDEGCGTKAPGLVARLMGLDSLPVSTVSELSSTSLCGSNSLGSSHCHEGALHSVADYFPVDSITMPLKPEKSSWGSRESKAQKVVNLSIKRFQAEMLPPKSAKPIPVTHNKLLSPIKNPGYIQPKSAAHTIEAAAKIIEASHQPYMRNRMSSVGSLFVPLRILDLKEKLEAAQYESKLIGLHTTNPVNGKLSEKRNNLYKSTPSEKNSSRHLASKGKSASLAIPSKANVQNRDMPTLNGNRECMKQNEKKSNQLSRSQKKQITDRARVVQQRACTGQNSNELGQNNQKLNSVTTKCKSTSKVNSNKPTRTWSSESSAGSRKKTNKGAVNANIEPKRSSTRVSDTQKEFPVSKKKSISQMKRYIHSDVQNEAKGSDDAVNSYESKSIKCNITTDGNIDQDAFSMKENKDVISFTFTSPLRRNIPESQSSTEQVMGTRNRINVNSYGHIDKLSPKKLSLSPSTLHVIDGDALSALLEKKLQELTSKINPPQCALATEGSSVGLRSSLEDKREQDRSFHPNLLSNKLDSMHDNCCSSSDNFVLNMNHQLQSSEPMEEPSCSSDSESGNGLSCLHKRAVTVFENNFFSESYLDSEDSIYGSTVYSSMQDEEVSDFSPINESLSLETDMKLSEQNSYTEVRGNMAIQQLSVMPNSGNFTRSTRNMELEYIKDILSNAELMVEEFVVCQTDKIIMPNLFDLLENQRNGAENYEEYSKLERKAIFDCVSNCLELRCRQVFVGSCKAWPKWAASVQRKNWLAEELYKEILGFRSMEEEVMVDKLVNKDMSIPWGRWLDFDIEAFEEGLELELDIVTNLINELVFDLLLV 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi376g00012 920 Pfam Domain of unknown function (DUF4378) 760 912 IPR025486 -
Gabi376g00012 920 MobiDBLite consensus disorder prediction 342 365 - -
Gabi376g00012 920 Pfam DUF761-associated sequence motif 97 127 IPR032795 -
Gabi376g00012 920 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 916 - -
Gabi376g00012 920 MobiDBLite consensus disorder prediction 367 437 - -
Gabi376g00012 920 MobiDBLite consensus disorder prediction 438 453 - -
Gabi376g00012 920 MobiDBLite consensus disorder prediction 282 454 - -
Gabi376g00012 920 MobiDBLite consensus disorder prediction 282 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi376g00012 Gabi-Chr376 71526 75314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi376g00012 3 918 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.775 1.09e-95 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi376g00012 - - gmx:100797988 1149.04