Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3769g00002 ATGGGTTTTCGTTTACCTGGTATCAGAAGGGCGTCATTAGCTGCAAACCAAACATCTTCAAAAGCCGTGGACGTGCCAAAGGGCTATCTTGCAGTGTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCCGTTTCATACTTGAGCCAACCTTCATTTCAAGACTTGTTGAGTCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGTAGCGAAGATGTCTTCCAACATATAACTTCACGCTTGAATGGGCTACAATACAAGTCATTCAAAAAATTAAGAATTCAAATATTTCTTTCTCACACAAGCTCTTGCATTTATTGTATTGTTCTTGGTGTTTTGCAACAGATAACAATGGGTTTCCGTTTACCAGGTATTAGAAGGGCATCATTTGCTGTAACCCAAGCAGCTTCCAAGGCTGTGAACGTCCCAAAAGGCTATCTTGCAGTGTATGTTGGAGAGAAAATGAAGCGGTTTGTGATTCCCATTTCATACTTGAGTCAACCTTCATTTCAAGAATTACTAAGCAAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACAATTCCTTGCAGTGAAGAAGCATTCTTAGACCTCACTTCTCGCTGA 642 0.4128 MGFRLPGIRRASLAANQTSSKAVDVPKGYLAVYVGEKMKRFVIPVSYLSQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQHITSRLNGLQYKSFKKLRIQIFLSHTSSCIYCIVLGVLQQITMGFRLPGIRRASFAVTQAASKAVNVPKGYLAVYVGEKMKRFVIPISYLSQPSFQELLSKAEEEFGYDHPMGGLTIPCSEEAFLDLTSR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3769g00002 213 Pfam Auxin responsive protein 12 89 IPR003676 GO:0009733
Gabi3769g00002 213 Pfam Auxin responsive protein 135 211 IPR003676 GO:0009733
Gabi3769g00002 213 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3769g00002 Gabi-Chr3769 11314 15205 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3769g00002 17 85 Calmodulin-binding Proteins AT3G43120 52.174 2.03e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3769g00002 - K14488 gmx:112997918 266.544