Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3768g00026 ATGGAACCCAGATTTGGGTATCTTGTTCTGCTGCAATTGTTATTGTTTTCGGGTTCAGTTCCTTTTATTGCAGAATCCAAGTGTACACAGGGTTGTCCACTAGCTTTAGGCTCCTACTACATATTGAGAGGCACAAACCTCACATATATTTCAGGGATTTTGGCATCCCAAGTTCTTACAAGTCCTGATGACATAGTTAGTTACAGCAAAGCTACAATACCAAACAAAGACAGTGTTCAATCAGACATAAGGGTCAACGCTCCATTCCCATGTGATTGTATTAATGGTGAGTTTCTTGGTCACACGTTTCAGTATGATGTTCAGAATGGGGACACTTATGAGAAAGTTGCTGGTACCAATTATGCCAACCTAACCAATGTTAATTGGTTGATGAAGTTCAATAGATATCCATCCAATAACATTCCTGACACTGGAACGCTTAATGTTACCATTAACTGTTCTTGTGGTGATAGTGATGTCTCAAATTATGGGTTGTTCATCACATACCCTCTTAGGCCTGGGGAGACTTTGGGGACTGTGGCAAGTTCTGTGGATCTTGACTCGGGGTTGTTGCAGAGGTACAATCCTGGTGTTAATTTCAACCAAGGGAGTGGCCTGGTTTATATTCCGGGCAAAGATCAAAATGGTAGCTATGTGTTTTTGGGGTCCAGAACAGGTCTTGGTGGTGGTGCTATTGCTGGAATAGCTGTTGGAGTAGTGGTTGTTCTTCTATTATTGGTAGTTGGTATATATGTCGGATATTTCCGGAAGAGGAAGATACAGAAGGAGGATCTTCTTCCACAAGATTCCAAAGCACTCTTTGCTCAAGATGGGAAGGGTATAGGTGCTGCAAATGAAACTTCAGGACCTGGTGGTCCTTCTGCCATCACAGGCGTAACAGTGGACAAATCAGTGGAGTTCTCATTAGATGAATTAGCAACGGCCACAGATAACTTTAGTATGGCTAAGAGAATTGGTAAAGGTGGTTTTGGCACTGTCTACTATGCAGAGTTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCTGAATTGAAAGTCCTGACACGTGTTCACCATCTTAACCTGGTGCGGTTGATCGGATATAGTATCGAGGGCTCTCTTTTCCTTGTCTATGAATTCATGGAGAATGGAAACTTAAGTGAACATCTGCGTGATTCAGGTAAAAGAGATCCACTGCCATGGGCTACCCGAGTGCAGATTGCTTTGGATTCCGCCAGAGGTCTTGAATATATTCATGAGCATACAGTGCCTGTATACATTCATCGTGACATAAAGACAGCAAATATATTAATAGACAAAAACTTCCGGGGAAAGGTTGCTGATTTTGGATTGACAAAACTGACAGAAGTTGGAAGCTCATCCCTTCCCACTGGTCGTCTTGTTGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGAGATGTGTCTCCCAAAGTAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAGCTTATTTCGGCTAAGGAAGCTATTGTCAAGACAAGCGAATCAGTTGCTGACTCAAAGGGCCTCGTAGCTTTGTTCGAAGGAGTTCTTAGTCAGCCTGATCCTACAGAAGATCTTTGCAAACTAGTGGATCCAAGGCTTGGGGATAACTACCCTATTGATTCAGTTCGCAAGATGGCTCAACTAGCCCACGCATGTACACAGGACAATCCCCAACTACGTCCAAGTATGAGATCAATTGTGGTTGCTCTTATGACACTTTCTTCAACGACTGATGATTGGGATGTTGGCTCCTTCTACGAAAATCAAAATCTTGTGAATCTGATGTCTGGAAGATAA 1860 0.4258 MEPRFGYLVLLQLLLFSGSVPFIAESKCTQGCPLALGSYYILRGTNLTYISGILASQVLTSPDDIVSYSKATIPNKDSVQSDIRVNAPFPCDCINGEFLGHTFQYDVQNGDTYEKVAGTNYANLTNVNWLMKFNRYPSNNIPDTGTLNVTINCSCGDSDVSNYGLFITYPLRPGETLGTVASSVDLDSGLLQRYNPGVNFNQGSGLVYIPGKDQNGSYVFLGSRTGLGGGAIAGIAVGVVVVLLLLVVGIYVGYFRKRKIQKEDLLPQDSKALFAQDGKGIGAANETSGPGGPSAITGVTVDKSVEFSLDELATATDNFSMAKRIGKGGFGTVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEFMENGNLSEHLRDSGKRDPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKTANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTSESVADSKGLVALFEGVLSQPDPTEDLCKLVDPRLGDNYPIDSVRKMAQLAHACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3768g00026 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Gabi3768g00026 619 Gene3D Phosphorylase Kinase; domain 1 298 389 - -
Gabi3768g00026 619 Gene3D Transferase(Phosphotransferase) domain 1 390 610 - -
Gabi3768g00026 619 FunFam LysM receptor kinase 2 298 389 - -
Gabi3768g00026 619 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Gabi3768g00026 619 CDD STKc_IRAK 325 588 - -
Gabi3768g00026 619 Pfam Protein tyrosine and serine/threonine kinase 321 590 IPR001245 GO:0004672|GO:0006468
Gabi3768g00026 619 SUPERFAMILY Protein kinase-like (PK-like) 300 591 IPR011009 -
Gabi3768g00026 619 ProSiteProfiles Protein kinase domain profile. 319 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3768g00026 619 FunFam PTI1-like tyrosine-protein kinase 3 390 605 - -
Gabi3768g00026 619 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 20 605 IPR044812 GO:0019199|GO:0045087
Gabi3768g00026 619 SMART serkin_6 319 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3768g00026 Gabi-Chr3768 578837 586323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3768g00026 13 619 Receptor kinase-like Gene Family AT3G21630 59.390 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gabi3768g00026 PK_Tyr_Ser-Thr 7.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3768g00026 K13429 - gmx:100777781 961.829