Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3766g00002 ATGGAAAGATATAAATTTTTGAGAGAGCTTGGGGATGGTTCTTGTGGTCATGTATATAAAGCCTGCGATATGAGAACTTTGGATATTGTCGCTGTCAAAAGGTTGAAAAGAAAGTTTTGTTTCTGGGAAGAATACACAAATTTAAGAGAAGTTAAGGTCCTCCGGAAAATGAATCACACAAATATCATAAAGTTGAAAGAGGTTGTTAGAGAAAATAACGAACTGTTTTTCATATTTGAGTACATGGATTTTAATCTTTATCAATTAATAAAAGAGAGAGAAAAGCCCTTTTCAGAGGGAGAGATACGGTGCTTTATGAATCAAGTGCTGCACGGACTTAGTCACATGCACAAGAAAGGATTCTTTCATCGGGATTTAAAACCTGAAAATTTGCTAGTGACAAATGATGTTCTTAAAATTGCTGATTTTGGACTGGCCAGAGAAGTATCATCAATGCCTCCGTATACCCAATATGTTTCAACACGGTGGTACCGAGCTCCAGAAGTTTTGTTGCAGTCCCCATGTTATACTCCTGCTGTTGACATGTGGGCAGTTGGTGCTATATTAGCTGAGCTTTTTACTTTGACCCCCTTATTTCCTGGTGAAAGTGAAATAGATCAACTGTACAAAATATACCGCGTACTTGGTATGCCAGATTTAACTGCTTTCACCATAGGGGCAAATGACTCTCGGCTATTGGACATTGTTGGTCATGAAGCTGTTCCACCAATGAAGCTTACTGATATCATTCCAAATGCTAGTTTGGAAGCTATAGATTTGATCACGCAACTGTTATCATGGGACCCATCTAGAAGGCCAGATGCAGATCAGTCATTGCAACATCCTTTTTTCCATGTGGATACATGGGTTCCTTATTCACTCAGTGACCCACTTGAGCTGAAGCTGAGTAGCAAGAGGGCAAAGCCAAATCTTGAACTGAAACTGCAGGATTTTGGCCCTGATCCCGATGATTGTTTTCTTGGCTTGACATTAGCTGTAAAGCCCAGTGTTTCAAACTTGGATGTGGTCCAAAATGTATCTCAGGGCATGGGAGAGAATGTGATATTTTGCTCGGATTTCAATAATCATTCAGACCAGTCAGTATTCTGGACATTATTATCTCCTGATCAAAATGGAGTTCATAACTCGGCAGAGACTTCATTATCATTGTCATTCGGTTCAGTTCAACATCCCCCACAGTCAGCGGGATTTTCTTTTCAGCCTTTGCAGCCTAACATCTTAACTACGCCATTTTTGGCTCTGTCTTCCCCGTTCCAGCGGGGGCACTGCCTTTGA 1296 0.4066 MERYKFLRELGDGSCGHVYKACDMRTLDIVAVKRLKRKFCFWEEYTNLREVKVLRKMNHTNIIKLKEVVRENNELFFIFEYMDFNLYQLIKEREKPFSEGEIRCFMNQVLHGLSHMHKKGFFHRDLKPENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPCYTPAVDMWAVGAILAELFTLTPLFPGESEIDQLYKIYRVLGMPDLTAFTIGANDSRLLDIVGHEAVPPMKLTDIIPNASLEAIDLITQLLSWDPSRRPDADQSLQHPFFHVDTWVPYSLSDPLELKLSSKRAKPNLELKLQDFGPDPDDCFLGLTLAVKPSVSNLDVVQNVSQGMGENVIFCSDFNNHSDQSVFWTLLSPDQNGVHNSAETSLSLSFGSVQHPPQSAGFSFQPLQPNILTTPFLALSSPFQRGHCL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3766g00002 431 Gene3D Transferase(Phosphotransferase) domain 1 82 284 - -
Gabi3766g00002 431 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3766g00002 431 FunFam Serine/threonine-protein kinase MHK 1 83 - -
Gabi3766g00002 431 CDD STKc_MAK_like 4 284 - -
Gabi3766g00002 431 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3766g00002 431 FunFam Probable serine/threonine-protein kinase DDB_G0268078 83 291 - -
Gabi3766g00002 431 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Gabi3766g00002 431 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3766g00002 431 Gene3D Phosphorylase Kinase; domain 1 4 81 - -
Gabi3766g00002 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Gabi3766g00002 431 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3766g00002 Gabi-Chr3766 6302 43866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3766g00002 7 284 MAP Kinase Gene Family AT4G01370 38.947 1.30e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Gabi3766g00002 Pkinase 2.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3766g00002 K08829 K08830 gmx:100792842 796.964