Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3765g00032 ATGAAGAAGAAGAACCATGTCTTGTTCTTCTTATTCTTCTTTCACTTACCATGTCTTTCATTGAGTCTCAACCACCACAACGACACCCATGCACTCACCCTCTTCCGCAGCCAAGCCGACTTACACGGCTCCCTCCTCCAAAACTGGACCGGCGGCGACGCCTGCCCCGCCGCATGGCGTGGCGTCCGCTGCTCCCCAAACGGCCGAGTCACATCACTCTCCCTCCCTTCCCTCAACCTCCGAGGAACCATTGACCCACTCACACCCCTCACCCACCTCCGCCTCCTCGACCTCCACGAAAATCGCTTAAACGGCACCGTTTCGCCTCTCCTCTCAAACTGCACCAACCTCAAGCTCCTCTACCTCGCCGGAAACGACTTCTCCGGCGAGATTCCGCCGGAAATATCCTCGGTAAAAGGCCTCCTCCGCCTTGACCTCTCCGATAACAACATACATGGAAATCTCCCAAAAGAACTTTCCCATTTGACTCAGCTTCTAACACTGAGGCTCCAAAACAACGTGCTCTCAGGTCACATACCTGATCTTTCATCTTCAATGGTGAACCTCAGGGAACTTAACATGACCAACAACGAGTTCTATGGACAGTTACCAAACCCAATGCTCAAAAAGTTCGGTTATGAAAGCTTCTCTGGTAATGAAGGACTATGTGGTGGTGGTTCAACTCAATTACCGGTTTGTTCTTCCACTGAAACAACCCCACCTTCTTTTTCTGAACCGGTTCAAACCGTTCCTTCAAACCCAAGCTCGTTGCCACAAACAAGCGTTATAGCAAGACCTGAAAACCAACAACAACAACAACATAAAGGGTTAAGCCCTGGAGCCATTGTTGCCATTGTTGTTGCAAACTGTGTGGCTTTGTTGGTGGTGACATCTTTCGTTGTTGCTCATTGTTGTGCTAGAGGTAGAAGCTCTAATTCCTTTGTGGGTAGTGGTGAGAGTGGGAAGAGAAAAAGTGGGAGTAGTTATGGGAGTGAGAAGAAGGTTTATGCCAATGATGGTGGTGGTGGTGGTGGTTGTGATAGTGATGGAACAAATGGTACTGATAGGAGCAAGCTTGTGTTTTTTGATAGGAGGAGTGAGTTTGAGCTTGAGGATTTGCTTCGTGCTTCTGCGGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTTTATAGGGCAGTGCTTGATGATGGATCCACTGTTGCTGTTAAGAGGCTTAAGGATGCTAACCCTTGTGCTAGGAATGAGTTTGAACAGTATATGGATGTGATTGGGAAGCTTAAGCACCCTAATATCGTTAGACTCAGAGCTTATTACTATGCCAAGGAAGAAAAGCTTCTTGTCTATGATTATCTCTCCAATGGAAGCTTGCATGCCCTTCTTCATGGGAATCGAGGTCCGGGAAGAATTCCATTGGATTGGACAACAAGAATAAGCTTGGTGTTAGGGGCAGCAAGAGGGCTTGCTCGGATTCATGCAGAGTATAGTGCAGCAAAAGTGCCTCATGGGAACGTGAAATCATCCAATGTGCTTCTTGACAAGAATGGTGTTGCTTGCATCTCTGATTTTGGGTTGTCACTGCTTTTGAACCCGGTTCACGCCGTTGCAAGATTGGGAGGGTACAAGGCTCCTGAACAAGCAGAACAGAAGAGGCTATCTCAACAAGCAGACGTGTACAGTTTTGGGGTGTTGTTGTTGGAAGTTCTTACAGGGAAAGCACCTTCATCACAATACCCTTCACCAGCACGTCCTCGTATGGATGAAGAGGAACAACAAGCATTGGATCTTCCAAAATGGGTTCGTTCAGTTGTGAAGGAAGAGTGGACAGGAGAGGTGTTTGATCAAGAACTCTTGCGTTACAAAAACATTGAGGAAGAACTTGTTTCAATGCTGCATGTTGGGTTGGCTTGTGTGGTTCCACAGCCAGAGAAGAGGCCAACCATGGTACAAGTTGTCAAGATGATTGAGGATATAAGGGTGGAGCAATCTCCTATTGGAGAGGACTATGATGAATCACGCAATTCACTTTCACCTTCCCTTCCCACCACTGAAGATGGGGTCTAG 2061 0.476 MKKKNHVLFFLFFFHLPCLSLSLNHHNDTHALTLFRSQADLHGSLLQNWTGGDACPAAWRGVRCSPNGRVTSLSLPSLNLRGTIDPLTPLTHLRLLDLHENRLNGTVSPLLSNCTNLKLLYLAGNDFSGEIPPEISSVKGLLRLDLSDNNIHGNLPKELSHLTQLLTLRLQNNVLSGHIPDLSSSMVNLRELNMTNNEFYGQLPNPMLKKFGYESFSGNEGLCGGGSTQLPVCSSTETTPPSFSEPVQTVPSNPSSLPQTSVIARPENQQQQQHKGLSPGAIVAIVVANCVALLVVTSFVVAHCCARGRSSNSFVGSGESGKRKSGSSYGSEKKVYANDGGGGGGCDSDGTNGTDRSKLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLDDGSTVAVKRLKDANPCARNEFEQYMDVIGKLKHPNIVRLRAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAVARLGGYKAPEQAEQKRLSQQADVYSFGVLLLEVLTGKAPSSQYPSPARPRMDEEEQQALDLPKWVRSVVKEEWTGEVFDQELLRYKNIEEELVSMLHVGLACVVPQPEKRPTMVQVVKMIEDIRVEQSPIGEDYDESRNSLSPSLPTTEDGV 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3765g00032 686 MobiDBLite consensus disorder prediction 234 260 - -
Gabi3765g00032 686 Gene3D Ribonuclease Inhibitor 21 92 IPR032675 -
Gabi3765g00032 686 CDD STKc_IRAK 381 657 - -
Gabi3765g00032 686 SUPERFAMILY L domain-like 25 207 - -
Gabi3765g00032 686 MobiDBLite consensus disorder prediction 311 351 - -
Gabi3765g00032 686 MobiDBLite consensus disorder prediction 662 686 - -
Gabi3765g00032 686 FunFam Nuclear pore complex protein NUP107 25 181 - -
Gabi3765g00032 686 MobiDBLite consensus disorder prediction 311 325 - -
Gabi3765g00032 686 SUPERFAMILY Protein kinase-like (PK-like) 379 654 IPR011009 -
Gabi3765g00032 686 Pfam Protein kinase domain 379 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3765g00032 686 FunFam pollen receptor-like kinase 1 346 450 - -
Gabi3765g00032 686 MobiDBLite consensus disorder prediction 668 686 - -
Gabi3765g00032 686 Gene3D Phosphorylase Kinase; domain 1 350 450 - -
Gabi3765g00032 686 ProSiteProfiles Protein kinase domain profile. 375 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3765g00032 686 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Gabi3765g00032 686 Gene3D Ribonuclease Inhibitor 93 230 IPR032675 -
Gabi3765g00032 686 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 660 IPR046959 -
Gabi3765g00032 686 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 451 666 - -
Gabi3765g00032 686 Gene3D Transferase(Phosphotransferase) domain 1 451 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3765g00032 Gabi-Chr3765 543860 546538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3765g00032 26 683 Receptor kinase-like Gene Family AT2G36570 66.716 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3765g00032 Pkinase 1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3765g00032 - - gmx:100804135 1019.22