Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3765g00031 ATGGCCTCTTGCGACGATGACGACGATTTCTCACTCCTCCGTGACGACAACCACCACCACCACCTCCACCAACCCTACCCGCCGCACCACCACTTCTCCACCGCCATCGTCGCCGTCTCATCCGTCGAGCAGAAACCCGCCTCCGACGACGCCGAAGACTACGGAAATCCCTTCGACGACGACTGCGGGAGCGAGAAGAGAAAGGAGCGGGAGGAGATCGGCGACGGAACGACGCAGTACGGATTCAACAAGAGATCGAAGGCGGCGGCGGCTGCTTCAAGCTGCAGCGGCGGTGGCAGCGGCAGCGGAGGAGGAGGAGCGGAGTACCGGAAGGACAGGGAGGAGTGGAGCGACACAGCGATCGTGTGCCTCCTTGAGGCTTACACGGAGAAGTTCACGCAGCTGAATCGGGGGAACCTGAGAGGGAGGGATTGGGAGGAGGTTGCGACGGTGGTGAGTGAGCGATGCGAGAACCAATCGAAGAGCGTGGAGCAGTGCAAGAACAAGGTGGATAACCTGAAGAAGAGGTACAAGCTAGAGAGGCATAGGATGAGCAATGGCTGCATTTCGACCAGTCATTGGCCTTGGTTCAAACAAATGGAACAGATCGTTGGTAATTCTCTGCCTGCAAAGTTTGCAGATGAGGATAAAGCTGTTTCTTCTTCTGGGAATTCACCCAGGCAATCCAAGAGATATGGAGTGGCAACGCCCAGCAGTGGAGGTCAAGTAAATAGCATGAAGTCCAAAGCATTGTCAAACCTTAGATGGCGGAGGGTAGTCCTCAAAATTAGTGGAGCAGCTCTTACTGGTTCTGATACCTGCAATATTGACCCTAAGGTGGCCATGTTAGTATCAAGAGAAGTTGCGATAGCTTCCCGCCTTGGTGTGGAGGTGGCGATTGTTGTTGGAGGTCGTAATTTCTTCTGTGGAGATGCATGGGTAACTGCAACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGGATGATGGCAACTGTGATGAATTCAATATTGCTCCAATCAACTCTAGAGAAGATGGGAGTTCAGACTCGTGTACAATCTTCAGTTGCCATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCCATCAGACATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTTTTGGCACTGGCAATCCACTCTTCTCAACTGACATTGCTGCAGCTCTACGTGCTTCAGAGCTTAATGCTGAGGCAGTCCTCAAGGGTACTAACGTAGATGGTGTATATGACTGCAACTCCCGCGACAACAATTTCACTTTCGAGCACATATCTTTCAGGGAGCTGGTGTCAAGAGGTGTCACCTCTATGGATATGGCAGCACTAACATTCTGTGAGGAAAATGCTATTCCTGTTGTGGTTTTTAATATATTGGAGCCTGGGAACATCTCAAAAGCTTTGTGTGGAGAACAAGTTGGCACGCTAATTGACCAAACTGGAGCAATAAGCTAA 1488 0.5087 MASCDDDDDFSLLRDDNHHHHLHQPYPPHHHFSTAIVAVSSVEQKPASDDAEDYGNPFDDDCGSEKRKEREEIGDGTTQYGFNKRSKAAAAASSCSGGGSGSGGGGAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVATVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMSNGCISTSHWPWFKQMEQIVGNSLPAKFADEDKAVSSSGNSPRQSKRYGVATPSSGGQVNSMKSKALSNLRWRRVVLKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQSSVAMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGTGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELVSRGVTSMDMAALTFCEENAIPVVVFNILEPGNISKALCGEQVGTLIDQTGAIS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3765g00031 495 SUPERFAMILY Carbamate kinase-like 255 488 IPR036393 -
Gabi3765g00031 495 Coils Coil 156 183 - -
Gabi3765g00031 495 PANTHER URIDYLATE KINASE 110 494 - -
Gabi3765g00031 495 FunFam Uridylate kinase isoform A 248 494 - -
Gabi3765g00031 495 FunFam Aspartate/glutamate/uridylate kinase family protein 116 179 - -
Gabi3765g00031 495 MobiDBLite consensus disorder prediction 218 245 - -
Gabi3765g00031 495 CDD AAK_UMPK-PyrH-Ec 257 489 IPR015963 GO:0005737|GO:0006221|GO:0033862
Gabi3765g00031 495 MobiDBLite consensus disorder prediction 215 245 - -
Gabi3765g00031 495 Gene3D - 251 489 IPR036393 -
Gabi3765g00031 495 MobiDBLite consensus disorder prediction 79 100 - -
Gabi3765g00031 495 MobiDBLite consensus disorder prediction 59 75 - -
Gabi3765g00031 495 MobiDBLite consensus disorder prediction 43 111 - -
Gabi3765g00031 495 Gene3D - 116 179 - -
Gabi3765g00031 495 Hamap Uridylate kinase [pyrH]. 254 489 IPR015963 GO:0005737|GO:0006221|GO:0033862
Gabi3765g00031 495 Pfam Myb/SANT-like DNA-binding domain 113 203 IPR044822 -
Gabi3765g00031 495 Pfam Amino acid kinase family 258 468 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3765g00031 Gabi-Chr3765 537933 542817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3765g00031 95 207 Trihelix Transcription Factor Family AT3G14180 38.333 1.86e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi3765g00031 AA_kinase 5.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3765g00031 - - gmx:100805176 829.706