Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3765g00024 ATGGGGGACAAGCACGAAGACGACAGCAGCGATTTCACGTCCGAGGACGAAGGCACCGAGGATTACCGACGTGGCGGTTACCACGCCGTTCGAATCGGCGACACCTTCAACGGTGGTCGCTACATCGTTCAGAGCAAGCTCGGTTGGGGCCATTTCTCCACTGTCTGGCTCGCTTGGGACACCCAACATTCTAGATATGTGGCTTTGAAAGTTCAAAAGAGTGCTCAGCATTACACTGAGGCAGCTATGGATGAGATAACGATTTTGCAACAGATTGCAGAGGGAGACCCGGATGATAAAAAATGTGTGGTGAAGCTTTTGGACCATTTCAAGCATTCTGGTCCAAATGGACAGCATGTTTGCATGGTATTTGAATACCTTGGGGATAATCTTTTAACTCTTATTAAGTATTCTGATTATCGCGGAATGCCTATCAACATGGTTAAAGAGATATGCTTTCATGTTCTGGTTGGATTGGATTACTTGCATAAGCAGCTTTCTATCATACATACTGACTTGAAACCCGAAAACATCCTCCTCTTGTCGGTGATAGATCCATCTAAGGATCCTAGAAAGTCCGGTGCTTCTCTTATTCTTCCTAATACTAAAGATAAGACGGTACTGGAGTCAGGGGCTGCGAAAGACACGAAAGCATCGAATGGAGATTTGATTACGAATCATAAAAAAAAGATTAAAAGAAAAGCGAAGCAGGCAGCTAGTGGATGCTTTGAGAAGGAAGCTTCTGAAGGAGTTAAAGGTTATCCTGAAACCTCTGGTGCTGTGGAATCTTCTCCAAATGCAAGTTCTGCAAGAGAACAAGCTTCTAGTTCCGCGGGCACTAGTAGGTTATCAGATGCTGATGGAACAAAGTTAAAAGAGCAGGGTAACAAAAGAGGAAGCCGCTCAATGAGACAGAAGCTGCTGGCATCAATTGATCTCAAGTGCAAGTTAGTTGACTTTGGAAATGCTTGCTGGACTTATAAGCAGTTTACAAATGATATCCAAACAAGACAATATCGGTGCCCAGAGGTGATCCTTGGATCAAAATATTCCATATCTGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGAGATGTGTTATTTGATCCTCACAGTGGTGATAACTTTGACAGGGATGAGGACCATTTAGCATTAATGATGGAACTTCTTGGAATGATGCCACGTAAGATTGCACTAGGGGGCCGATATTCCCGTGATTTCTTCAATAGATATGGTGATTTGAGGCACATCCGACGGTTGCGATTCTGGCCCTTGAATAAAGTCCTCATGGAGAAGTATGATTTCAGTGAGAAAGATGCAAATGACATGACTGACTTTTTGGTTCCTATCCTTGACTTTGTTCCTGAGAAACGGCCTACGGCTGGTCAGTGCCTTCTTCATCCATGGATCGATGCAGGTCCACGCCTTTTGGAGCCATCTGTGCCTTCTTCTACTCACAACCCTGCTGCTGAAACTGGTATTTCGGACCAGAAGAAAAGGGACAAAGATGATAGGGAGGCCATGGAGGCAGGAATGGGAAATATTGCTATCAATTCAGATTCTAAACCACTCATATATTCTCCATCTAAGAAGGCCTTCCAAGGCAGCCACAAGTAG 1632 0.4436 MGDKHEDDSSDFTSEDEGTEDYRRGGYHAVRIGDTFNGGRYIVQSKLGWGHFSTVWLAWDTQHSRYVALKVQKSAQHYTEAAMDEITILQQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGMPINMVKEICFHVLVGLDYLHKQLSIIHTDLKPENILLLSVIDPSKDPRKSGASLILPNTKDKTVLESGAAKDTKASNGDLITNHKKKIKRKAKQAASGCFEKEASEGVKGYPETSGAVESSPNASSAREQASSSAGTSRLSDADGTKLKEQGNKRGSRSMRQKLLASIDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSISADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLMEKYDFSEKDANDMTDFLVPILDFVPEKRPTAGQCLLHPWIDAGPRLLEPSVPSSTHNPAAETGISDQKKRDKDDREAMEAGMGNIAINSDSKPLIYSPSKKAFQGSHK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3765g00024 543 MobiDBLite consensus disorder prediction 286 300 - -
Gabi3765g00024 543 MobiDBLite consensus disorder prediction 259 284 - -
Gabi3765g00024 543 Gene3D Phosphorylase Kinase; domain 1 27 126 - -
Gabi3765g00024 543 SMART serkin_6 41 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3765g00024 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Gabi3765g00024 543 MobiDBLite consensus disorder prediction 498 514 - -
Gabi3765g00024 543 MobiDBLite consensus disorder prediction 482 543 - -
Gabi3765g00024 543 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3765g00024 543 Gene3D Transferase(Phosphotransferase) domain 1 296 475 - -
Gabi3765g00024 543 Gene3D Transferase(Phosphotransferase) domain 1 95 182 - -
Gabi3765g00024 543 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 9 501 - -
Gabi3765g00024 543 FunFam Serine/threonine-protein kinase SRPK-like protein 305 475 - -
Gabi3765g00024 543 ProSiteProfiles Protein kinase domain profile. 41 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3765g00024 543 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Gabi3765g00024 543 CDD STKc_SRPK 30 475 - -
Gabi3765g00024 543 MobiDBLite consensus disorder prediction 252 302 - -
Gabi3765g00024 543 Pfam Protein kinase domain 310 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3765g00024 543 Pfam Protein kinase domain 42 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3765g00024 543 SUPERFAMILY Protein kinase-like (PK-like) 36 488 IPR011009 -
Gabi3765g00024 543 FunFam CMGC/SRPK protein kinase 27 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3765g00024 Gabi-Chr3765 454031 462884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3765g00024 8 527 EF-hand Containing Proteins AT5G22840 68.762 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Gabi3765g00024 Pkinase 3.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3765g00024 K08832 - gmx:100810777 992.645