Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3765g00011 ATGGGTTTTGAGCAGGACACAACAACATTGGTGCCTCCATGGCTTGAGTCAATGCTAAAGACACCATTTTTCAATGTGTGTCGGACTCACGGTGATGCCGCGAGGAGCGAGTGTAACATGTTTTGCCTTGATTGCAATGGGGATGCATTTTGCTTTTATTGCCGTTCCTCAAGACACAAGGATCACCAAGTCATTCAGATAAGGAGATCTTCTTATCACGATGTGGTGAGGGTGGCGGAAATTCAGAAGGTTTTGGACATTAGTGGAGTACAGACATACGTGATCAACAGTGCCAGAGTTCTGTTTCTGAATGAGAGGCCTCAACCAAAATCTGGGAAAGGGGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCTTTTCGCTTCTGTTCTTTAGGGTGTAAGGCTTCAACAATGGAGGGTATGTCAAGGAGATCAATCTCTTCAAGACAAGAAGAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGACATGTACCCGGCCACGCTTCCTCCACCTCCTTCAAACGCAAGGAGAAGGAAAGGCATTCCTCATAGGGCTCCTTTTGGCTCCTAA 585 0.4632 MGFEQDTTTLVPPWLESMLKTPFFNVCRTHGDAARSECNMFCLDCNGDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKASTMEGMSRRSISSRQEEEEELREGSQQDMYPATLPPPPSNARRRKGIPHRAPFGS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3765g00011 194 SUPERFAMILY B-box zinc-binding domain 24 69 - -
Gabi3765g00011 194 Gene3D Classic Zinc Finger 18 86 - -
Gabi3765g00011 194 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 192 - -
Gabi3765g00011 194 MobiDBLite consensus disorder prediction 149 164 - -
Gabi3765g00011 194 Pfam PLATZ transcription factor 68 138 IPR006734 -
Gabi3765g00011 194 MobiDBLite consensus disorder prediction 146 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3765g00011 Gabi-Chr3765 215326 216591 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gabi3765g00011 PLATZ 2.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3765g00011 - - qsa:O6P43_006587 332.028