Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3765g00006 ATGCCTTGTTCACTCTCTCTGTCATCTCTCCCTCTTTTTCCTCACCACAAAACTACTCCTTTCCCTCTCACTCTAAAATCTTATCCACTTCACCACCTCAATGTGAAATCCTCAATTAACAAAAATCCCTCCACCGATTCCAGTTCCAACTCCAACACCGACAACAACACCAAACCCAGTTCCTGGGTAAGCCCAGATTGGCTTACTTCACTATCTAGGTCCCTAACCACAGGGAAAGACGATTCTGGCATTCCTCTAGCAAGTGCCAAGCTTGATGATGTTTCTGATCTTCTGGGTGGTGCTCTTTTTCTCCCTTTGTTCAAATGGATGAAAGAGTATGGCCCCATTTACCGGCTTGCCGCTGGCCCAAGAAATTTTGTGGTAGTTAGTGACCCTGCCATTGCCAAGCATGTGCTCAAGAATTATGGGAAATATGCTAAGGGTCTTGTTGCTGAGGTCTCAGAGTTCCTCTTTGGGTCTGGTTTTGCAATTGCTGAAGGTCCACTCTGGATGGCGAGGCGCAGGGCTGTTGTTCCATCTCTTCACAAACGATACTTGTCAATTATAGTGGATAGGGTATTTTGTAGATGTGCTGAGAGATTAGTGGAGAAGCTACAACCTGATGCACTCAATGGAACTGCTGTTAACATGGAGGACAAGTTTTCGCAGTTGACTCTTGATGTTATCGGTTTATCTGTATTCAACTACAACTTTGATTCACTTAATGTGGAGAGCCCTGTTATTGATGCTGTTTACACTGCATTGAAAGAGGCAGAGGCTCGATCAACTGATCTTTTGCCATATTGGAAGGTTAAATTTCTTTGTAAGATAATCCCAAGACAAATAAAGGCTGAAAAGGCTGTTAGTGTTATCAGGAAAACTGTTGAGGATCTTATTGAAAAATGTAAAGTGATTGTAGAATCTGAGGGTGAAAGAATTGATGTTGATGAATATGTGAATGACACTGATCCTAGTATCCTCCGGTTCTTGCTTGCCAGCAGAGAAGAGGTTTCTAGTGTGCAATTAAGGGATGATCTTCTGTCACTATTAGTTGCGGGTCATGAGACCACTGGTTCAGTGTTGACCTGGACAATTTATCTTCTAAGTAAGGATTCTTCCTCATTGGCAAAAGCACAAGAAGAGGTAGACAGAATTTTACAGGGAAGGCGTCCTGCCTATGAAGATATTAAAGATCTTAAGTTCTTGACACGCTGCATTATTGAGTCACTCCGGCTTTACCCACATCCTCCTGTATTGATAAGAAGAGCTCAAGTTCCCGATGAGCTTCCTGGTGCTTACAAAGTCAATGCTGGTCAAGATATTATGATTTCTGTGTACAACATACATCATTCTTCTGAGGTTTGGAATAGAGCTGAAGAGTTTTTGCCAGAAAGATTTGATTTGGATGGTCCAGTGCCAAATGAAACAAATACGGATTTCAGATTCATTCCATTCAGTGGAGGACCCCGCAAGTGTGTTGGTGATCAGTTTGCTTTATTGGAAGCTACAGTTGCTCTTGCAATCTTTCTACAGCACATGAACTTTGAGCTGGTTCCTGATCAGAATATTAGTATGACTACAGGTGCAACAATACATACAACAAATGGCCTGTACATGAAACTGAGCCAACGGTTGAAATAG 1641 0.4229 MPCSLSLSSLPLFPHHKTTPFPLTLKSYPLHHLNVKSSINKNPSTDSSSNSNTDNNTKPSSWVSPDWLTSLSRSLTTGKDDSGIPLASAKLDDVSDLLGGALFLPLFKWMKEYGPIYRLAAGPRNFVVVSDPAIAKHVLKNYGKYAKGLVAEVSEFLFGSGFAIAEGPLWMARRRAVVPSLHKRYLSIIVDRVFCRCAERLVEKLQPDALNGTAVNMEDKFSQLTLDVIGLSVFNYNFDSLNVESPVIDAVYTALKEAEARSTDLLPYWKVKFLCKIIPRQIKAEKAVSVIRKTVEDLIEKCKVIVESEGERIDVDEYVNDTDPSILRFLLASREEVSSVQLRDDLLSLLVAGHETTGSVLTWTIYLLSKDSSSLAKAQEEVDRILQGRRPAYEDIKDLKFLTRCIIESLRLYPHPPVLIRRAQVPDELPGAYKVNAGQDIMISVYNIHHSSEVWNRAEEFLPERFDLDGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEATVALAIFLQHMNFELVPDQNISMTTGATIHTTNGLYMKLSQRLK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3765g00006 546 SUPERFAMILY Cytochrome P450 98 544 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 PRINTS E-class P450 group I signature 482 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 PRINTS E-class P450 group I signature 492 515 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 PRINTS E-class P450 group I signature 224 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 PRINTS E-class P450 group I signature 361 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 PRINTS E-class P450 group I signature 341 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 PRINTS E-class P450 group I signature 444 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 PANTHER CYTOCHROME P450 FAMILY 4 108 544 - -
Gabi3765g00006 546 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 PRINTS P450 superfamily signature 483 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 PRINTS P450 superfamily signature 492 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 PRINTS P450 superfamily signature 352 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 Pfam Cytochrome P450 106 528 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3765g00006 546 CDD CYP97 104 538 - -
Gabi3765g00006 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 485 494 IPR017972 GO:0005506|GO:0016705
Gabi3765g00006 546 MobiDBLite consensus disorder prediction 39 61 - -
Gabi3765g00006 546 Gene3D Cytochrome P450 87 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3765g00006 Gabi-Chr3765 140619 148423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3765g00006 25 544 Cytochrome P450 AT3G53130 79.502 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3765g00006 K09837 - gmx:100803324 922.539