Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi375g00001 ATGGGCGAAGGAGGTGTGGCGTGCATGCCTTTGCAGCAGCAGCAGCAACATGTTATGGAGAGGTTGCCGAATGCAGCGGAGAAGTCCCTTTGCGGAGGCAAGAATGGGAATGGGAATGGGAACGGGTTCAGTTCTGAGTTGCTCAAGGTTACTGACAACAAGAAGAAGAAGATGAAAGTGAAGAAGAAAGAGGCACCCGCCGCAAAGAAGGCGGGAGATGTCAAGAGTGAATTAGCATCGGACAGAGTAAGCAGCAAGGATGGCAATGGTGTTGAGAGTGGCGAATTATGTGGGCAGAAGGAAGAAGTGGAAGAGGGTGAATTGGGTACTTTGAAGTGGCCGGGGAGTGAGCTGGAGAATGGAGAGTTTGTGCCGGAGAAGCCTCAGCCGCTGCCGATGCGGAGGAGTGAGATTGAGAATGGAGAGATTGTTAGTGAGAGGTGGAAGAAAGGGGAGGTGGAGAAGGGAGAGTTTGTTTCTGGAAAATGGAGAAAGGAGGATGTGGAGAAGGGGGAGATACTTGCTGGGAAGGGTAGGAAAGTAGAAACTGAGAAAGGGGAATATGGGTCCTGGAGAGGTGGTATAAAAGATGATGTTGAAAAGGGAGAATTCATTCCAGATAGGTGGCATAGGGGAGACATGGGGAGGGATGATTATGGTTACCATAGAATCCGCAGGTACCAGTCAGGTAGGGACAAAGTGTGGAAAAGTGAACGCGAGCGCACACCGCCATCTGGGAGATATACAGGTGATGAATTCGTTAGGAAGAAGGAGTTCAATAGAAGTGGGAGTCAGCATGCTAAAAGTGCACCCAGGTGGGAGAGTGGACAAGAGAGAAATATAAGGATAAGTTCAAAGATTGTGGATGAGGAGAAAAACGAACACAGCAATGGTAGGAACCAGACACGGGATTACTCTTCTGGAAGTCGGTTGAAGAGGCATGGTAATGAATCAGACAGCTCTGAGTGGAAACAGTATGGAGATTATGCCTGTTTAAAAAGTCGAAGACTTTCTGATGATAGCTCACGCCATGTTTATTCAGAGCACTATTCTCGACCTTCTGTGGAGAGATCTTATAGAAATAGTTCTTCAAAATTATCAGCAGACAAGTATACTTCTAGGCATCATGAATCTTCTTTGCCATCCAGGTCAGCTTATGATAAGCATGGTCGCAGCCCTGGTCATTCTGAACGGTCCCCACACGATCGAGCTCGGTATTATGATCATAAAGATCGCACTCCAGTGCGTCAATCACCATATAGCCGTGAGAAATCCCCGCATGGTCGTGAGCGATCCCCATATGATAGGAATTGGGATAGAAGTCGTCACCATGATCACAAACTGAGAAGTCCTGCTCATGCTGAGCAGTCCCCCCAAGATCGAGGTCGACATCATGACCGCAGGGACCGTACTCCAAATTTAGTAGAGCAATCCCCACTTGATCGAACTAGGAAAAATATTCATCGAGAAACAAGTAGTAAAACCTTATCGACTGAAAAACATAACTCTCAATATAGTTGTAAGGATAATGAAGATAAACACATCCAAAAGGAGTCAAATATTTCAGGTATAGAATCTCAATGCAAAAGAAATATGCATGATGCCAATGGGTCTATTGAGAAAGATGTCTGCAGTGAACTTGAAAAGGAACAACAGTCCTGCAGCCCGATTGCAAGCTGCAAAGACTCTCCTTGCTTGGAGCCACCTCTTGAGGAGCTGCCTTCTATGGAAGAAGATATGGACATATGTGATACCCCTCCACATGTCCCTGTGGTGGCAGATTCGTCATCAGGGAAATGGTTTTACCTTGATTATGGTGGTGTAGAACATGGACCTTCTAAATTATCTGACATCAAGGTCCTTGTTGATGACGGTGTACTAATGTCAGATCACTTTATTAAGCACTTAGATAGTGACAGGTGGTTAACTGTTGAAAATGCAGCATCACCACTTGCAGCTCAGACTTTTCCGTCAATTGTGTCAGACACCATAACCCAGCTGGTAAACCCTCCAGAAGCTCCTGGTAATCTTTTGGCCGATACTGGAGGTATTCTTCAATCTGGTCCTGAGCATTATGAGGAAATGCCGGCCGCTTTGCTGCAGCCAATGGTATGCCCTGATGACAGTGTTCCTGCATCTGAACTGTTGGAGGACTTCCACATTGATGAAAGGGTTGGAGTTCTGTTAGAGGGTTATGATGTCATTCCTGGAAGGGAGCTTGAGGCAATAAAAGAAGCGTTGCAAATGAATTTTGAATATGCAAAATGGGAGGGATTAGAAGACCATGAAGGTTTTCCTTGGCATGAAACTTGCCTCAGCATAGAGTGTGATTCTAAAATTGATTTCGCTTCAAAAGAATATGAGTCTCAGTTAAGTATGCCCTCTGACAAGGATAATGCATTTACCCCCGGTGTCCCTGGTGACTGGTTTTCTGCTCGATGGTCATGCAGAGGCGGGGACTGGAAGAGGAATGATGATGCCCAAGATAGATATTGTAAGAAGAAGCTTGTCCTAAATGATGGGTTTCCTATATGTCAAATGCCTAAATCTGGGTGTGAAGATCCTCGTTGGCCTCAAAAAGATGACTTATATTATCCATCACACAGCAGGAGGCTTGATCTTTCTCTTTGGGCTTTTTGTGCTGATGAGAGGGTTGATTGCAGTGCTATGAGCAGACCAGGCCAAAGTAAGCTTGCTTCTGTTAGGGGAGTGAAAGGAAATGTCCTTTCAGTGGTCAGGATAAATGCATGTGTAGTCAAGGACCAGGGATCATTGGTCTCCGAGTCTCTCCCCAAGACCCGTGGCAAGGATAGAAATCATTCAAGGTCAAGGCCTTTGTCTTCAACCAGTGATAGCAAGAGATCATCAACTGAAAAAGATTCTCTGTCAAATACTTTTAATGATCAAGGTTCTCAAGGCTCATGCAGGAGCATGGAATTCATTAATATTCCTAAACAACATCTTTGTACTGTCCATGACTTACAGTTACATTTGGGTGAATGGTATTATCTTGATGGTTCTGGGCGTGAAAGAGGGCCTTCATCATTTTCAGAGCTTCAGTTTTTAGTAGACCAAGGAATTATAAAAAAGTATAGCAGTGTGTTTAGGAAATGTGATAAACTCTGGGTTCCTATTACCCCTTCTACAGAAACTTATGATGTCAGTCTCAGGAGCCACAGAGAAAGCCGTTTAGTGGCTGGTGAATGTTCTGGACGTTCATCAACGCAAAGTCAAGGTGTTTCATTCGGTGCACCTTACTCTAAGCCAAATTTGTTTAACAGCTTACACCCTCAGTTTGTTGGTTATACTTGTGGGAAGCTACATGAATTAGTAATGAAATCATATAAGAGCCGAGAATTTGCTGCAGCTATAAATGAGGTTTTGGATCCATGGATCAATGCAAGACAGCCAAAGAAAGAAATTGAGAAACAAACATATTGGAAATCAGAAGGCGAAGCACGTTCCTCGAAAAGAGCGCGACTTCTGGTTGATGATAGTGAAGAAGATAGTGATTTCGAAGATGGAAGTCTGGCTATTGAGAATGATGAATTCACATTTGAGGCTCTATGTGGCGATGCTACTTTCTCCCTAGACGAAAGTGACATTACTGATTCAAATGTGGGAAGCTGGGGCTTATTGAATGGTCAAATGTTGGCACGAATATTCCACTGTTTGAGATCAGATTTGAAGTCCCTTGTCTTTGCATCAATGACTTGCAAGCACTGGAGAGCTTCTGTAAGGTTTTACAAAGAAGTCTCGAGACAAGTCAATTTGTCATCCTTGGGTCATTCTTGCACTGATTCCATAATGTGGAACATTGTGAATGCTTATGAGAAAGACAAGATCAAATCGATGACTCTGATTGGTTGCACCAATATTACTGCTGACATGCTTGAGAAAATTCTTCTTTCATTTCCTGGTTTATGTAAAGTAGACATTAGAGGGTGCAGCCAGTTTGCAGAGCTGACTCCTAAATTTACCAATGTGAAATGGATTAAGAGCCGAAGTTCATGCATGACCAAAATTGCAGAGGAGCCACATAAAATCAGAAGCCTTAAACAGATTACTGAGCAAACTTCATCTGTTTCCAAGGCCAGCAGTTTAGCTATTAGGGATGATTTTGGTGAGCTGAAGGATTATTTTGATAGTGTGGATAAGAGAGACACAGCAAAGCAATTATTCCGTCGAAACTTATACAAGAGGTCAAAATTATATGATGCTAGAAAGTCCTCTTCTATTCTATCTAGGGATGCACGTACAAGACGATGGTCAATTAAGAAATCTGAGAGTGGTTTCAAGAGGATGGAGGAATTTCTTGTTTCTAGACTGAAGGAAATTATGAAAGCAAACTCCTGTGAATTTTTTGTGCCTAAGGTTGCAGAAATTGAAGCTAAAATGAAAACTGGTTATTACACTGGGCATGGGTTGAGCTCTTTCAAGGAGGACATCAGTAGAATGTGCCGTGATGCAATAAAAGCAAAGAATCGGGTTGATGCTAGTGATATGAATCATGTCATTACTTTATTTATTCAGCTTGCAACACAGTTGGAGGAGAGTTCTAAATATGTGAATGACAGAGATGCACTATTGAAGTTATGGGGAAATGAATCACCGTCCGCATTCTTTTCTACTTCCTCTAAGTGCAAGAAGAATAGATTGGTGACTGAGAGGAAGTATAGGAGTAATGAAACACATGGTGGTTTGGATAATGGAGAGTATGCTTCTGATAGAGAAATTAGGAGGCGTTTATCAAAGTTGAATAAGAAATCTATGGACTCTCAGAGTGAGACATCTGATGATAACCTGGATTGGTCTTCTGAAGATGGAAAGACTGATGGTGATTCTACAACCTCTGACACTGAAAGTGACCCAGAAAATCAAATTAGGGAGTCAAGAAGAGATGGATACTTTACACGCAATGATGGGTTGGATTTCATTAATGATGAGCGTGAATGGGGAGCTCGCATGACGAAAGCAAGTCTGGTTCCACCTGTTACTCGGAAATATGATGTCATTGATCAATATATCATTGTAGCAGATGAGGAGGATGTACGAAGGAAGATGCGGGTATCATTACCAGATGACTATGCAGAGAAGTTGAGTGCACAAAAGAATGGCACTGAGGAGTCTGATATGGAGCTGCCTGAAGTCAAGGATTACAAACCTAGAAAGCAGCTTGGAAATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCCTTTACACACAATCTTTTACTTGATTCTATGCCAGAGGAGTTAGATTGGTCTCTACAAGAGAAGCATTTGTTTATAGAAGACATACTCCTACGGACATTGAATAAGCAAGTTAGATATTTTACTGGAACTGGAAGCACTCCAATGAGCTATGCTTTGCAGCCTGTTATTGAAGAAATTGAAAGGTGTGCTGAGGAGCACTGTGATGCAAAGATGGTGAGAATGTGTCAAGGTATCGTAAAAGCCATGGCCAGTCGTCCGGATGACAAATATGTAGCTTATAGAAAGGGACTTGGTGTTGTTTGCAACAAGGAAGAAGGCTTTGGTGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTGTATCCTGTGTGGAAGTGGTTCGAGAAACAAGATGGGATTCGGTCTCTACAGAAAAGTAGTAAAGATCCAGCTCCAGAATTCTATAACATCTACCTTGAGAGGCCAAAGGGGGATGCTGATGGGTATGACTTAGTTGTCGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGAATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTGACTGCTGTTGATGGCCATTATCAAATCGGTATTTATAGTGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTTGATTATAATTCTGTTACAGAGAGCAAGGAGGAATATGAAGCATCTGTTTGTTTGTGTGGAAGCCAAGTTTGCCGTGGGAGTTATCTGAATCTGACTGGTGAAGGGGCTTTCCAAAAGGTACTGAAGGAATGGCATGGAATTCTTGATCGCCATTATTTGATGCTAGAAGCTTGTGAATCAAACCTCGTTTCTGAAGAGGACTATAATGACCTGGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCAGATTGGCTAGTTGCTTATGCAGCTCGCCTTGTGAGATTTGTCAATTTTGAAAGAACAAAACTTCCTGAGGAAATTCTAAAGCATAATCTGGAAGAAAAAAGAAAATATTTTTCAGATGTATGTCTTGAAGTTGAGAGGAGTGATGCAGAGGTTCAGGCTGAGGGTGTATACAACCAGAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTCATGAGATGTATTTTTGGTGATCCACTGAAAGCTCCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAGTTGTTTCCTTCCTCTGGAAAGGAGAGGATTCATTTGTTGGGGAGCTTCTTCAGTGCCTGGCTCCTCATGTGGAAGAGTCTACCCTGAATGATCTCAAGTCCAAAATTCATGCTCGTGATCCTTCAAGTTCTGGGGATATACGAAAAGAGGTTCAGAAATCTCTATTGTGGTTGAGGGATGAGGTTCGAAATCTTCCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTGATCCATATTTATGCTTATACCAAATACTTCTTTAGGATACGGGATTATCAAACTACTACTTCACCGCCTGTCTATATTAGTCCGCTTGACTTAGGTCCGAAGTACACTGACAAGTTGGGAACAGGATTTCAGGAGTACCGGAAGATATATGGTGATAATTATTGTTTAGGGCAGCTAATTTTTTGGCATAATCAGAGTAATGCAGAACCAGATTGTACCCTGGCTAGAGTCAGCAGGGGATGCTTGTCATTACCAGACATCAGTTCCTTTTACGCCAAGGTTCAGAAGCCTTCTCGACATCGTGTTTATGGTCCAAGGACTGTCAGATCCATGCTGGCAAGAATGGAGAAGCAGCCCCAGAGACCTTGGCCTAAAGATCGGATATGGTCATTCAAAAGTTCTCCGAAAATTTTTGGCAGCCCAATGTTAGACGCTGTAATTAATAACTCTCCGCTGGACAAGGAGATGGTTCATTGGTTGAGGCACAGACCTGCCATATTCCAGGCCATGTGGGACCAGTGA 7170 0.4294 MGEGGVACMPLQQQQQHVMERLPNAAEKSLCGGKNGNGNGNGFSSELLKVTDNKKKKMKVKKKEAPAAKKAGDVKSELASDRVSSKDGNGVESGELCGQKEEVEEGELGTLKWPGSELENGEFVPEKPQPLPMRRSEIENGEIVSERWKKGEVEKGEFVSGKWRKEDVEKGEILAGKGRKVETEKGEYGSWRGGIKDDVEKGEFIPDRWHRGDMGRDDYGYHRIRRYQSGRDKVWKSERERTPPSGRYTGDEFVRKKEFNRSGSQHAKSAPRWESGQERNIRISSKIVDEEKNEHSNGRNQTRDYSSGSRLKRHGNESDSSEWKQYGDYACLKSRRLSDDSSRHVYSEHYSRPSVERSYRNSSSKLSADKYTSRHHESSLPSRSAYDKHGRSPGHSERSPHDRARYYDHKDRTPVRQSPYSREKSPHGRERSPYDRNWDRSRHHDHKLRSPAHAEQSPQDRGRHHDRRDRTPNLVEQSPLDRTRKNIHRETSSKTLSTEKHNSQYSCKDNEDKHIQKESNISGIESQCKRNMHDANGSIEKDVCSELEKEQQSCSPIASCKDSPCLEPPLEELPSMEEDMDICDTPPHVPVVADSSSGKWFYLDYGGVEHGPSKLSDIKVLVDDGVLMSDHFIKHLDSDRWLTVENAASPLAAQTFPSIVSDTITQLVNPPEAPGNLLADTGGILQSGPEHYEEMPAALLQPMVCPDDSVPASELLEDFHIDERVGVLLEGYDVIPGRELEAIKEALQMNFEYAKWEGLEDHEGFPWHETCLSIECDSKIDFASKEYESQLSMPSDKDNAFTPGVPGDWFSARWSCRGGDWKRNDDAQDRYCKKKLVLNDGFPICQMPKSGCEDPRWPQKDDLYYPSHSRRLDLSLWAFCADERVDCSAMSRPGQSKLASVRGVKGNVLSVVRINACVVKDQGSLVSESLPKTRGKDRNHSRSRPLSSTSDSKRSSTEKDSLSNTFNDQGSQGSCRSMEFINIPKQHLCTVHDLQLHLGEWYYLDGSGRERGPSSFSELQFLVDQGIIKKYSSVFRKCDKLWVPITPSTETYDVSLRSHRESRLVAGECSGRSSTQSQGVSFGAPYSKPNLFNSLHPQFVGYTCGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQTYWKSEGEARSSKRARLLVDDSEEDSDFEDGSLAIENDEFTFEALCGDATFSLDESDITDSNVGSWGLLNGQMLARIFHCLRSDLKSLVFASMTCKHWRASVRFYKEVSRQVNLSSLGHSCTDSIMWNIVNAYEKDKIKSMTLIGCTNITADMLEKILLSFPGLCKVDIRGCSQFAELTPKFTNVKWIKSRSSCMTKIAEEPHKIRSLKQITEQTSSVSKASSLAIRDDFGELKDYFDSVDKRDTAKQLFRRNLYKRSKLYDARKSSSILSRDARTRRWSIKKSESGFKRMEEFLVSRLKEIMKANSCEFFVPKVAEIEAKMKTGYYTGHGLSSFKEDISRMCRDAIKAKNRVDASDMNHVITLFIQLATQLEESSKYVNDRDALLKLWGNESPSAFFSTSSKCKKNRLVTERKYRSNETHGGLDNGEYASDREIRRRLSKLNKKSMDSQSETSDDNLDWSSEDGKTDGDSTTSDTESDPENQIRESRRDGYFTRNDGLDFINDEREWGARMTKASLVPPVTRKYDVIDQYIIVADEEDVRRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKDYKPRKQLGNEVIEQEVYGIDPFTHNLLLDSMPEELDWSLQEKHLFIEDILLRTLNKQVRYFTGTGSTPMSYALQPVIEEIERCAEEHCDAKMVRMCQGIVKAMASRPDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKSSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGILDRHYLMLEACESNLVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFVNFERTKLPEEILKHNLEEKRKYFSDVCLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPLKAPPPLEKLSPEAVVSFLWKGEDSFVGELLQCLAPHVEESTLNDLKSKIHARDPSSSGDIRKEVQKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIRDYQTTTSPPVYISPLDLGPKYTDKLGTGFQEYRKIYGDNYCLGQLIFWHNQSNAEPDCTLARVSRGCLSLPDISSFYAKVQKPSRHRVYGPRTVRSMLARMEKQPQRPWPKDRIWSFKSSPKIFGSPMLDAVINNSPLDKEMVHWLRHRPAIFQAMWDQ 2389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi375g00001 2389 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 166 2389 - -
Gabi375g00001 2389 ProSiteProfiles SET domain profile. 1816 1959 IPR001214 GO:0005515
Gabi375g00001 2389 CDD SET_SETD2-like 1833 1981 - -
Gabi375g00001 2389 SMART set_7 1825 1965 IPR001214 GO:0005515
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 333 355 - -
Gabi375g00001 2389 SUPERFAMILY SET domain 1834 1982 IPR046341 -
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 29 138 - -
Gabi375g00001 2389 Gene3D SET domain 1799 1990 IPR046341 -
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 306 321 - -
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 34 48 - -
Gabi375g00001 2389 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1970 2389 IPR045606 -
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 232 263 - -
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 232 519 - -
Gabi375g00001 2389 Pfam SET domain 1904 1959 IPR001214 GO:0005515
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 1585 1634 - -
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 504 519 - -
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 369 496 - -
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 283 299 - -
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 928 972 - -
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 1603 1634 - -
Gabi375g00001 2389 MobiDBLite consensus disorder prediction 65 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi375g00001 Gabi-Chr375 15634 37337 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi375g00001 SET 3.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi375g00001 K22748 - gmx:100781921 3979.48