Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3756g00001 ATGGCAGGGAGTTTTTGTTACAAGGACGTGGTTCCATTCACTGCAATGGTTGCAATTGAGTGCAGCAACGTTGGTGTTAACGTTTTATTCAAAGCAGCTACACAGAAGGGGTTGAGTTACTATGTCTTCGTCGTTTATTCATTTGCTGTCTCCAATCTTGTTTTTCTTTTGCCTCTGCCCTTTGTCTTCCTAAGGTCAAGTAGGCTTCCTCCGTTCAAGGTGTCTCTCATCTTCAAACTTTTCTTCCTTGGAGTGATTGGAGTTGTAGCTCAGCTTTGTGGATATAAAGGACTTCAATACACTTCACCTACTCTTGCTTCTGCTCTTAGCAACCTTATACCGGCTTTTACTTTCATACTAGCTGCCTTTTTCAGGATGGAGAAGGTGGCTTTGGGAAGCTCAAGCACCCAAGCCAAAATCTTGGGTTCTGCAGTATCTATATTAGGAGCACTCATAGTTGTTCTCTACAAGGGCCCCACAGTCTTATCAGCTTTATCACCACAACTATCACCTACCATTGATTCTCCAATGGACTCAACAGCACAAACGAATTGGGTTCTTGGTGGGTCTCTACTTGTCGTTGAGTTTCTTCTGGTTCCAATATGGTACATTGTTCAGGCTAATGTTATGAAAGAATATCCAGCAGAGTTTATCGTGGTCTTCTTATACAACCTATGTGGGACTTTCATATCTGCACCAGTGTGCATACTATTAGAAGAAAACTTAAGTTCTTGGAAGATAAATCCTGATATTACATTGATCGCCATTATATACTCAGGACTCTTTTGCACAGGCCTAAGTTGCTTGGTTCACACTTGGGGCATCCATCTAAAAGGCCCTGTTTATATATCTATGTTTAAGCCTCTCTCAATAGCAATTGCTGCCACTTTGAGTGCTATATTCCTCGGTGATGCACTGTATTTCGGGACTGTTGTTGGAGCATTAATACTATCAATTGGGTTTTATGCGGTTTTATGGGGCAAAACAAAAGAAGAATTGATTGAGGACTTTGACATAGATGGAACTCAACCTCCATCCAGTAGTAAGACTCCTTTGTTGTTGAGTTACAATGTAAAAGATAACGGAGAAATCACCCATAATGATTGTTGA 1110 0.4099 MAGSFCYKDVVPFTAMVAIECSNVGVNVLFKAATQKGLSYYVFVVYSFAVSNLVFLLPLPFVFLRSSRLPPFKVSLIFKLFFLGVIGVVAQLCGYKGLQYTSPTLASALSNLIPAFTFILAAFFRMEKVALGSSSTQAKILGSAVSILGALIVVLYKGPTVLSALSPQLSPTIDSPMDSTAQTNWVLGGSLLVVEFLLVPIWYIVQANVMKEYPAEFIVVFLYNLCGTFISAPVCILLEENLSSWKINPDITLIAIIYSGLFCTGLSCLVHTWGIHLKGPVYISMFKPLSIAIAATLSAIFLGDALYFGTVVGALILSIGFYAVLWGKTKEELIEDFDIDGTQPPSSSKTPLLLSYNVKDNGEITHNDC 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3756g00001 369 Pfam EamA-like transporter family 199 325 IPR000620 GO:0016020
Gabi3756g00001 369 Pfam EamA-like transporter family 27 154 IPR000620 GO:0016020
Gabi3756g00001 369 PANTHER WAT1-RELATED PROTEIN 9 342 IPR030184 GO:0016020|GO:0022857
Gabi3756g00001 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 329 - -
Gabi3756g00001 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3756g00001 Gabi-Chr3756 7593 12083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3756g00001 1 362 Nodulin-like Gene Family AT5G40240 54.670 1.95e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3756g00001 - - gmx:100805667 530.406