Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3755g00071 ATGGCTTCAGCTAAGAACAGTGGCAAATTCATCAAGTGTGTTGATGATGATGACACTCACAAGGTGAAAAATATGGGTGAAAGCCAAGATTGGGAGATTGAAAAGGGAAAGGGTAACGATTCAAGCTTTCAGAGACGCCAATGGAAGCCAGTTTTTGATGACGCTTCCATGTTACATAATAGGCCTCTCAAGAAGCTTCGTAGCCCTGAACGTGAAAACCCAAACCAATTATCCTCTATTCCTCTTCCTACAACTTCACCTCTCAATGTGTGTCCTTCTCCTTCATCCTCTTCAAGAATCATGTTTCCTTTTGCTTTTGATTCTTCCCAACACCCCATGCAGTTCCCAAACCAATTTGGAACCACCAATTTGCCTTTGTTTCGTCCACCAATTCAGCCATCACAAAACCAGCACCAACAGAACCAACAGATGATATCTTTTGGATCCCAACAACAAAACATTGCATACCCACCAACCTTAGCCCGAGATTATGCATTTCTACAGCAACAACAACAACAACAACATCACCATCAGCTTCTTCAGTATTGGGGTGAAGCACTGAATCTAAGTCCAAGAGGAAAAATGATGTTAATGAACAACAACAGGTTGGGACCAGATGGTAGGCCATTGTTTAGGCCACAATCTCAGCCTTATAACACTACAAAGCTCTACAGAGGAGTGAGGCAACGCCATTGGGGAAAATGGGTTGCTGAAATTCGTCTACCTCGAAACAGAACTCGTCTCTGGCTAGGCACATTTGACACAGCAGAAGATGCTGCTATGGCCTATGACCGTGAGGCTTTTAAGTTGAGAGGAGAGAATGCTAGACTCAATTTCCCTGAGCTCTTTCTTAACAAGGATAAACCACCTTCTTCTTCACCAGCTCCAACAACAACAACTTCTTCTGCTTCTGCTTCTGCTTCTGCTTGTTCTCCATCTCACAGCACTACAAAACAGCCTGAACTTGTTCCTGAACCACCAACAGAAGAGTCTGCTGAGAATGATTCAGGAATTGGATCGAGTGATGCTACTACTGTGAGTGATGAGGTTCATGCAGCTGCTGCAGGTTCTGAAGTAGTTGAAGGAGTTTCACAGGAATTGGTTTGGAGTGAAATGTCAGCATGGTTCAATGCTATTCCAGCTGCTTGGGGTCCAGGTAGTCCTGTGTGGGATGATTTGGACACTACCAATAACCTTCTTTTGCAGTCACACATTCCTTTTGTCAATTCAGATCAACAACAAGATACTAATGCTTATGATGCTCAGAGACAAGAACATAACATGGAACCAGGTTCTTCCATTAGGCCTTTCTTCTGGAATGATCAGGATTGA 1332 0.4354 MASAKNSGKFIKCVDDDDTHKVKNMGESQDWEIEKGKGNDSSFQRRQWKPVFDDASMLHNRPLKKLRSPERENPNQLSSIPLPTTSPLNVCPSPSSSSRIMFPFAFDSSQHPMQFPNQFGTTNLPLFRPPIQPSQNQHQQNQQMISFGSQQQNIAYPPTLARDYAFLQQQQQQQHHHQLLQYWGEALNLSPRGKMMLMNNNRLGPDGRPLFRPQSQPYNTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKDKPPSSSPAPTTTTSSASASASACSPSHSTTKQPELVPEPPTEESAENDSGIGSSDATTVSDEVHAAAAGSEVVEGVSQELVWSEMSAWFNAIPAAWGPGSPVWDDLDTTNNLLLQSHIPFVNSDQQQDTNAYDAQRQEHNMEPGSSIRPFFWNDQD 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3755g00071 443 MobiDBLite consensus disorder prediction 21 42 - -
Gabi3755g00071 443 CDD AP2 222 282 IPR001471 GO:0003700|GO:0006355
Gabi3755g00071 443 SUPERFAMILY DNA-binding domain 223 281 IPR016177 GO:0003677
Gabi3755g00071 443 SMART rav1_2 223 286 IPR001471 GO:0003700|GO:0006355
Gabi3755g00071 443 MobiDBLite consensus disorder prediction 72 92 - -
Gabi3755g00071 443 FunFam Ethylene-responsive transcription factor 2 222 281 - -
Gabi3755g00071 443 MobiDBLite consensus disorder prediction 290 322 - -
Gabi3755g00071 443 ProSiteProfiles AP2/ERF domain profile. 223 280 IPR001471 GO:0003700|GO:0006355
Gabi3755g00071 443 MobiDBLite consensus disorder prediction 283 343 - -
Gabi3755g00071 443 MobiDBLite consensus disorder prediction 423 443 - -
Gabi3755g00071 443 MobiDBLite consensus disorder prediction 21 45 - -
Gabi3755g00071 443 Pfam AP2 domain 224 272 IPR001471 GO:0003700|GO:0006355
Gabi3755g00071 443 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 33 393 - -
Gabi3755g00071 443 Gene3D AP2/ERF domain 223 281 IPR036955 GO:0003700|GO:0006355
Gabi3755g00071 443 PRINTS Ethylene responsive element binding protein signature 246 262 IPR001471 GO:0003700|GO:0006355
Gabi3755g00071 443 PRINTS Ethylene responsive element binding protein signature 224 235 IPR001471 GO:0003700|GO:0006355
Gabi3755g00071 443 MobiDBLite consensus disorder prediction 59 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3755g00071 Gabi-Chr3755 549772 551545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3755g00071 1 392 AP2-EREBP Transcription Factor Family AT2G20880 44.643 3.65e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi3755g00071 AP2 3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3755g00071 - - qsa:O6P43_028790 495.738