Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3755g00060 ATGGGGTGTTGTGTCTCAACAAGTAGTAAGAGTACTTGTAGTAGCAAGAGCAATGGAGACATGGTCTCTCCATCCTGTCTAGAAATCGGATTCTGTGGTCAAAAGCGTGCAAGGAGAACATTCTCTGATCATGTTGTCTCTCTGCACCAGTTACCATCCTTACCCAACAGAGTTTTCACCAATGGGAAGAGCCGGTCTTCTTGTGTATTTACACAGCAGGGTCGTAAGGGTATTAATCAGGATGCTATGATTGTATGGGAAGATTTCATGTCAGAAGATGTGATCTTTTGTGGTGTTTTTGATGGCCATGGTCCACACGGTCACCTTGTTGCACGCAAAGTCAGGGATGTCTTGCCAATAAAACTGCTTTCATTTCTGCATTCTTCCGAATCGAAGCGAAATGGGTCAGGTAAAGCTTGTTTCAAAGGGAACATAAAGCCTGAAAGTGGAGAGTCTGAGAAGGATTTCTCTACTGAGGATGAACTGAATCCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTGAGGTCTCATCCAAATTTGGATTGCTTTTGTAGTGGGAGCACAGCTGTTACTATAGTAAAGCAGGGATCAAATTTGTTCATGGGCAATATTGGAGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGAGGAAAGAATTAAAAGCTGCAAGGGTAGGGTATTTGCATTGCAAGATGAGCCAGAAGTTCCTAGGGTGTGGTTGCCTTTTGATAATGCACCTGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAATACGGTGTGATTTCTATTCCTGAATTTTCTCACTGCCTGCTCACAGACAGAGATCAGTTCATTGTTCTTGCCTCAGACGGGGTCTGGGATGTTTTGAGCAATGAAGAGGTGGTGGAGATAGTATCTTCAGCACCAACTCGGTCATCAGCAGCGAGAAATGTGGTGGATTCTGCTGCTCGAGAGTGGAAACTGAAATATCCCACTTCAAAAATGGATGACTGTGCTGTTGTGTGCCTTTTCTTGGATGGGAAAATGGACTCGGAATCTGATTGTGATGAACAATGCTTTTCTTCTGCAAACATCCAGAGCAACCCAGTTGAGTCAGATGATGGTCAAAAGTCCGAGCCATCTTTGCTAAGGAACTTTACTTTGAGATCCTCAGAAGAAAATGAGACCATTGGAGGAGAAGTTTCTGTTGATGTTGAAGATCGAACATCATTAGCTGAAGATCAAAACTGGTCAGGTCTAGAGGGTGTCACCCGAGTAAACTCACTGGTTCAACTTCCTAGATTTTCTCAGGAAAAGCCAAACTCTTAA 1404 0.4373 MGCCVSTSSKSTCSSKSNGDMVSPSCLEIGFCGQKRARRTFSDHVVSLHQLPSLPNRVFTNGKSRSSCVFTQQGRKGINQDAMIVWEDFMSEDVIFCGVFDGHGPHGHLVARKVRDVLPIKLLSFLHSSESKRNGSGKACFKGNIKPESGESEKDFSTEDELNPMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREEERIKSCKGRVFALQDEPEVPRVWLPFDNAPGLAMARAFGDFCLKEYGVISIPEFSHCLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARNVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDCDEQCFSSANIQSNPVESDDGQKSEPSLLRNFTLRSSEENETIGGEVSVDVEDRTSLAEDQNWSGLEGVTRVNSLVQLPRFSQEKPNS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3755g00060 467 CDD PP2Cc 65 370 IPR001932 -
Gabi3755g00060 467 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Gabi3755g00060 467 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Gabi3755g00060 467 MobiDBLite consensus disorder prediction 1 20 - -
Gabi3755g00060 467 MobiDBLite consensus disorder prediction 132 158 - -
Gabi3755g00060 467 Pfam Protein phosphatase 2C 140 348 IPR001932 -
Gabi3755g00060 467 Gene3D - 56 372 IPR036457 -
Gabi3755g00060 467 SMART PP2C_4 55 368 IPR001932 -
Gabi3755g00060 467 PANTHER PROTEIN PHOSPHATASE 53 368 IPR015655 GO:0004722|GO:0006470
Gabi3755g00060 467 FunFam probable protein phosphatase 2C 52 57 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3755g00060 Gabi-Chr3755 442582 446191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3755g00060 1 467 PP2C-type Phosphatase Gene Family AT1G03590 70.253 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3755g00060 - - gmx:100788149 842.802