Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3755g00052 ATTTCCTATAAATATATAAAAATTTATGAGATTTATATTTTCTTTTTCTATCTATTCTCTTTATGTGCGCTTGCACTTTCAAACAAGGTGAGCTTCGACTTCCCATCTTTCAGCGTCGGCAACAACAACATCACACTCGTGGGCGATTCCTATCTAAGGAACGGCGTCGTTGGCCTCACAAACGCCATCGACGAGCCCACTTCCAGCGCCGGAGCACTCGTATACAACAAACCCATTTCCCTCCTCGACCCTCTAACAAACACCACCGCTTCATTCTCAACAACCTTCTCCTTCTCCATCAACAACGTCAACCCTATCTCCTTCGGCGACGGTCTCGCCTTCTTCCTCTCCCACGACAACCGCTCCCTCGGCACCGGCACCGGCATCGGCGGAGGAGGATCCCTCGGCCTCCCCAACAACTTCGTCGCGGTTGAGTTCGACACGCGCTTCGACTCTCGTTTCGATGACCCAAACGAGAACCACGTTGGTTTGGACATCGACACCATGAACTCTCTCATGACCGGTGACCCTATCTTGCATGGGATTGATCTCAAGAGCGGGAACACAATCACCGCTTGGATTGATTACAAGAGTGATCACACGGTTCTCAATGTTTTCTTGAGTTATGCGCGTTCTAAACCTTTGGAGCCTGTCCTCACTGTTCGTGTTGATCTTTCTCTGTACTTCAAGGACGCCGTTTACGTTGGGTTCTCTTCTTCTACTGAGGGAAGCACCGAGCTTCATCAAATTGAGAGTTGGAGTTTTCATACCATTGGTTTTGTTCCCGCAAGACCTAGGTTGCAGCCTCATAACGTTTCTGACAATTCCGTTAGTGTAACAGTGGGGAATAACAATATCCCTGCTTCTAGTTCCAGCAAGAATCATGATAAGAGGGTTAGGTTTGGAATTGGTTTTGTCATTGGGGGTCCTGTGTTTTTCTGTGCTGTTGTGTTTTCTTTCTTGGGGTATATTTCTGTTCGGAAATGGAGGAGGGGTGTTAGAAATGATCAAAAGAGTTTCAAGAGTGAGTTTGTGGCGTGTCCTAGGGAGTTTGATTACAAAGAGTTGAAATCTGCTACGAGAGAGTTTCATCCTAGTAGGATCGTTGGGCATGGTTCGTTTGGGACAGTTTATAAGGCCTTCTTTACATCTTGCGGAACCATTGCTGCTGTTAAGAGGTCAAGACATTCCCATGAAGGCAAGATAGAGTTCCTTGCTGAACTTTCCATCATAGCTGGTTTGAGGCACAAGAATTTGGTTCAGCTACAAGGTTGGTGTGTTGAGAAAGGAGAGTTGCTTCTTGTGTATGACTTTATGCCCAATGGAAGCTTGGATAAGATGCTTCACAAGGAATCTGAAAGGGGGAAATTGTTGAATTGGTCTCACAGGTTCAATATTGCTCTTGGGTTGGCTTCTGTGCTGGTTTACCTTCATCAAGAATGTGAGCAGAGAGTTATTCATAGGGATATTAAGACAGGGAACATATTGCTTGATGGAAACTTCAACCCCAGGTTGGGGGATTTTGGATTGGCAAAACTCATGGATCATGATAAGAGTCCTGTTTCAACGTTGACTGCTGGAACAATGGGGTACCTTGCACCTGAATATCTTCAGTATGGAAAGGCTACTGATAAAACTGATGTTTTCAGCTATGGAGTGGTTGTGCTTGAAGTGGCTTGTGGGAAGAGGCCAATTGAAAGAGAGGGCCCAAAAATGGTGAATCTGATTGATTGGGTTTGGGGGCTGCACTCTGAAGGGAAGATAATTGAGGCTACAGATAAAAGGTTGAATGGTGAATTTGAGGAGGAGGAAATGAGGAAGCTGTTGCTCTTGGGGTTGAGCTGTGCTAACCCTGATAGTGCTGAGAGGCCTTCCATGAGAAGAGTCATGCAGATTCTCAACAATGAAGCTGCACCTCTTGTTGTGCCAAAAGTGAAGCCAAGCCTCACTTTCTCATCTGACCTTCCTCTGAGTATTGATGAGATTGTTTCAGATGCTGAAGAGTTCAATACCGGTCAATCTATGTGTGAGATAAAAATTGAGTGA 2046 0.4555 ISYKYIKIYEIYIFFFYLFSLCALALSNKVSFDFPSFSVGNNNITLVGDSYLRNGVVGLTNAIDEPTSSAGALVYNKPISLLDPLTNTTASFSTTFSFSINNVNPISFGDGLAFFLSHDNRSLGTGTGIGGGGSLGLPNNFVAVEFDTRFDSRFDDPNENHVGLDIDTMNSLMTGDPILHGIDLKSGNTITAWIDYKSDHTVLNVFLSYARSKPLEPVLTVRVDLSLYFKDAVYVGFSSSTEGSTELHQIESWSFHTIGFVPARPRLQPHNVSDNSVSVTVGNNNIPASSSSKNHDKRVRFGIGFVIGGPVFFCAVVFSFLGYISVRKWRRGVRNDQKSFKSEFVACPREFDYKELKSATREFHPSRIVGHGSFGTVYKAFFTSCGTIAAVKRSRHSHEGKIEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLHKESERGKLLNWSHRFNIALGLASVLVYLHQECEQRVIHRDIKTGNILLDGNFNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSYGVVVLEVACGKRPIEREGPKMVNLIDWVWGLHSEGKIIEATDKRLNGEFEEEEMRKLLLLGLSCANPDSAERPSMRRVMQILNNEAAPLVVPKVKPSLTFSSDLPLSIDEIVSDAEEFNTGQSMCEIKIE 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3755g00052 681 Gene3D Phosphorylase Kinase; domain 1 324 438 - -
Gabi3755g00052 681 CDD lectin_legume_LecRK_Arcelin_ConA 30 259 IPR001220 GO:0030246
Gabi3755g00052 681 FunFam L-type lectin-domain containing receptor kinase VIII.1 439 651 - -
Gabi3755g00052 681 CDD STKc_IRAK 369 635 - -
Gabi3755g00052 681 Pfam Protein kinase domain 364 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3755g00052 681 ProSitePatterns Legume lectins beta-chain signature. 142 148 IPR019825 -
Gabi3755g00052 681 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524
Gabi3755g00052 681 ProSiteProfiles Protein kinase domain profile. 363 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3755g00052 681 SMART serkin_6 363 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3755g00052 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Gabi3755g00052 681 FunFam L-type lectin-domain containing receptor kinase VIII.1 326 438 - -
Gabi3755g00052 681 PANTHER - 47 643 - -
Gabi3755g00052 681 Gene3D - 27 261 - -
Gabi3755g00052 681 Pfam Legume lectin domain 30 258 IPR001220 GO:0030246
Gabi3755g00052 681 Gene3D Transferase(Phosphotransferase) domain 1 439 641 - -
Gabi3755g00052 681 SUPERFAMILY Protein kinase-like (PK-like) 346 656 IPR011009 -
Gabi3755g00052 681 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 257 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3755g00052 Gabi-Chr3755 369243 380526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3755g00052 11 668 Receptor kinase-like Gene Family AT5G55830 59.675 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gabi3755g00052 Pkinase 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3755g00052 - - adu:107496163 947.962