Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3755g00035 ATGCAGATTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGCCTCAGGCATACCTTCCTAATAGTTACTCAGAGATTGACATTCAAGTTGAGGATTCCTGTTTCAACCAAGATCCCCCCCTCCCCGTATATCTCAAGTTTGAAGATGTAGAGTATAAGGTGAGAAATAGCCAAGCAGCTTCTAATAACCCAGTGAAGATAATGGTGTCAAAGGTAGCCACACAACTCCACGTGGAAGAAGATAGATACAAGAAAATTTTAAAGGGTATCACAGGAAGCATTGGTCCTGGAGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGGAAGACAACCTTGTTGAGGGTTGTAGGAGGAAGATTACTTGACAATGTAAAGGGAAAGATAACTTATAATGATGTGCAATATACTTCGGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAAGAAACATTAATCTTCTCTGCATTCTTAAGGCTGCCAACCAACATGAGCAAGCAACAAAAATATGCTAGAGTGGAAAGCACAGTCAAGGAGCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGGGGATTTCTCAAAGGCATATCAGGAGGAGAAAGGAAGAGAACAAGCATAGGCTATGAAATTCTTGTTGATCCTTCACTGCTGCTACTTGATGAACCAACTTCAGGCCTTGATTCCACCTCAGCAAACAGACTGCTTGTTACTCTTCAGGGACTTGCCAAGGGTGGAAGGACCATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCCGTTTACTATGGGAAGGCTAGAGACTCAATAGAGTACTTTTCATCTTTGAGGTTCATTCCGGAAATACCAATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGACAAGTGGATGACATAAATGTCCCACGAGATATTTTGGAAGATCAAGAATCTACTGACCCTTCAAAAACTGTTATTAAATATCTACAACTCAAGTATAAAGACTTACTGGAGCCAAAAGAAAAAGAAGAGAATCATGGAACAGCAAACACACCAGAACATCTTCAAGTAGCTATTCAGGTTAAAAAGGAATGGACATTGAGTTGGTTGGACCAATTCGTTATTCTTTATAAGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAATTAAGACTAGTTCAAGCACTTGGAATCGCACTTTTGTTGGGGCTTCTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAACTCAGAGATCAGGTTGGTTTAATGTTCTATATCTGTATATTCTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTCTTCCCATTTGAAAAGGTTTACTTGGTGAAAGAAAGGAAAGCAGACATGTATAGACTAAGTGTATACTATGCATGCAGCACACTGTGTGACATGGTGGCACATGTTTTCTATCCTACATTTTTCATGCTTATCTTGTACTTCATGGCTGGCTTTAAGAGAACTGTTGCTTGCTTTTTCCTGACGTTGTTTGCAGTGCTGTTAATAGCTATAACAAGTCAAGGTGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTGATACTAATGTTATTCCTTCTAACAGGTGGTTATTATGTCCAGCACATACCAAAGTTCATGCAGTGGTTGAAGTATTTGTCGTTCATGTACTATGGGTTCAGACTGCTTCTAAAAGTGCAGTATTCAGGAGACCAACTATATGAGTGTGAAAGCAAAGGAGGGTGCAGGACCCTTCAGAGTTCACCTTCATTTGACACAGTAAACTTGAAAGGAGGGTTAAGTGAAGTATGGGTTCTGTTGGCCATGGCTCTATGCTTTAGGTTGTTTGCCTACTTCTGTCTCCGAAGACGAATTGACGTTTGCAATTAG 1998 0.4089 MQIAGSNGFGHSMEFMPQAYLPNSYSEIDIQVEDSCFNQDPPLPVYLKFEDVEYKVRNSQAASNNPVKIMVSKVATQLHVEEDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLDNVKGKITYNDVQYTSAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPTNMSKQQKYARVESTVKELGLERCRHTKIGGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANRLLVTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKARDSIEYFSSLRFIPEIPMNPAEFLLDLATGQVDDINVPRDILEDQESTDPSKTVIKYLQLKYKDLLEPKEKEENHGTANTPEHLQVAIQVKKEWTLSWLDQFVILYKRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYACSTLCDMVAHVFYPTFFMLILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYLSFMYYGFRLLLKVQYSGDQLYECESKGGCRTLQSSPSFDTVNLKGGLSEVWVLLAMALCFRLFAYFCLRRRIDVCN 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3755g00035 665 Gene3D - 70 305 IPR027417 -
Gabi3755g00035 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 303 IPR027417 -
Gabi3755g00035 665 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 38 652 - -
Gabi3755g00035 665 FunFam ABC transporter G family member 22 76 305 - -
Gabi3755g00035 665 SMART AAA_5 98 289 IPR003593 GO:0016887
Gabi3755g00035 665 Pfam ABC transporter 89 239 IPR003439 GO:0005524
Gabi3755g00035 665 Pfam ABC-2 type transporter 396 604 IPR013525 GO:0016020|GO:0140359
Gabi3755g00035 665 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 311 IPR003439 GO:0005524
Gabi3755g00035 665 Pfam ABC-2 type transporter 268 328 IPR043926 GO:0140359
Gabi3755g00035 665 CDD ABCG_EPDR 44 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3755g00035 Gabi-Chr3755 241059 243948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3755g00035 87 272 Calmodulin-binding Proteins AT2G36910 29.843 2.80e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3755g00035 K05681 - gmx:100815259 1186.02