Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3755g00032 ATGAATTCTAGGTGCTTCCTTCCACCAGAGTCCTTGTTTAACTCAAGTAGTATGGTTTCATTTTCTTCAAATTCTGCAGCAGGAGAAGATAGAGTGGCTAGTGCTCCAAGTAGGCCTCCACGTGCCTCCCCACCTTCGTTTTTGGTTCGGATGGCCATGAGAATATCTAGAGCAAGATGGTTTACCTTCTTGAGAAGAGTATTTCATTACCAAAATGGATCAAGGTCCAGTCTTGGCTCTAATCCTTTCAATTCTAGCAATTGGATGATGCTGGAATTTATTGCTTTGATGGTTCAAATAACCATTACAACATTCACTTTAGCCATTTCAAAGAGGGAGAGACCCATTTGGCCTATGAGGATATGGATAGCTGGTTATGATATTGGTTGTGCTCTTAATCTGCTGCTACTTTATGGGCGCTACCGTCAAATTTATCTGACTCAAAGAGATGCTCTTAACCTTTCTGATATGGAACAACAGAGAAATAATGAAGAAACTAGGACGTCGCACTTGATGAATAAATGCCGAACTTCACTTGAGCTTTTCTTCGCCATATGGTTTGTGATGGGCAATGTTTGGATTTTTGACTCACGTTTTGGATCTTTTCATCAAGCTCCAAAACTCCATGTGCTTTGCATCACCCTGCTTGCTTGGAATGCAATCTGCTACTCTTTCCCTTTCCTACTGTTTCTGTTGTTATGCTGTTGTGTGCCACTAATTAGCAGCCTCCTCGGGTACAACATGAACATGGCCTTTTCTGATAGAGGAGCATCTGATGATCAAATTTCACAACTTCCAAATTGGAGACATAAAGAAGCTCATACCAAGTTAGAGCTTGGCAATGACTCTAAAGGCAGTGAGAAATCGATCAATGAAGATTCAGAATGTTGCATTTGCTTAGCCAAGTACAAAGACAAAGAAGAAGTGAGACAATTGCCCTGTTCCCATATGTTCCACTTAAAATGTGTGGATCAATGGCTCAAAATTATGTCCTCCTGCCCTCTTTGCAAACAAGGTTTAGAAAGGGAGAAATAG 1035 0.4097 MNSRCFLPPESLFNSSSMVSFSSNSAAGEDRVASAPSRPPRASPPSFLVRMAMRISRARWFTFLRRVFHYQNGSRSSLGSNPFNSSNWMMLEFIALMVQITITTFTLAISKRERPIWPMRIWIAGYDIGCALNLLLLYGRYRQIYLTQRDALNLSDMEQQRNNEETRTSHLMNKCRTSLELFFAIWFVMGNVWIFDSRFGSFHQAPKLHVLCITLLAWNAICYSFPFLLFLLLCCCVPLISSLLGYNMNMAFSDRGASDDQISQLPNWRHKEAHTKLELGNDSKGSEKSINEDSECCICLAKYKDKEEVRQLPCSHMFHLKCVDQWLKIMSSCPLCKQGLEREK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3755g00032 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 245 342 IPR013083 -
Gabi3755g00032 344 ProSiteProfiles Zinc finger RING-type profile. 296 337 IPR001841 -
Gabi3755g00032 344 SMART ring_2 296 336 IPR001841 -
Gabi3755g00032 344 CDD RING-H2_EL5-like 295 336 - -
Gabi3755g00032 344 Pfam Ring finger domain 295 337 IPR001841 -
Gabi3755g00032 344 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 18 339 - -
Gabi3755g00032 344 SUPERFAMILY RING/U-box 287 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3755g00032 Gabi-Chr3755 223131 226063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3755g00032 39 340 C3H Transcription Factor Family AT4G26580 68.092 1.59e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3755g00032 - - gmx:100813670 594.349