Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3755g00022 ATGGATTCCTTAGAGCAAAGAAAGGGTGGCACTGAGAAACCAACCACTTCAGCAATTGACATGTATAAACAACCATTTATCATAGGTGTTGCTGGGGGAGCAGCATCTGGCAAGACAGCAGTTTGTGATATGATTATTCAGCAGCTTCATGATCAAAGAGTTGTGCTTATTAATCAGGATTCTTTTTACCATAATTTGACTGACGAGGAACTTTTAAGAGTACAAGATTACAACTTTGACCACCCTGAAGCTTTTGATACTGAGCAATTGCTGCATGTCATGGACAAGTTGAAGTGTGGCCAAGCAGTAGATATTCCGAAGTATGACTTTAAGGATTACAAGAGTGATGTGTTTCCAGCAAGAAGGGTAAACCCTGCAGATGTTATTATTTTGGAAGGGATCCTTATTTTCCATGATCCACGTGTTCGGGCATTGATGAGTATGAAGATATTTGTTGACACAGATGATGATCTTCGTCTGGTAAGAAGGATTAAGCGTGATACTGCTGAGAATGGTCGCGAAATTGTAGCTGTGCTTGATCAGTATTCTAAATTTGTGAAGCCGGCTTTTGATGACTTTATCTTTCCCACAAAGAAGTATGCTGATCTCATTATACCCCGTGGAGGAGATAATCATGTGGCTATTGATTTGATTGTACAGCATATCCGCACAAAACTTGGTCAGCATGACCTGTGTAAAATATATCGTAATTTTTATCTCATTCAGTCTACTTTTCAGATACGCAGTATGCATTCCCTGATACGTGATCATCTGACAACAAAGCATGACTTCATATTTTATTCCGATCGTTTGATTCGTTTGGTTGTAGAATATGGACTAGGGCATCTTCCATTTACCGAAAAGCAAATAATCACTCCTAATGGGTCCGTATACAGTGGTGTGGAGTTTTCTAAGAAGTTATGCGGTGTCTCCATCATCAGGAGTGGGGAGAGCATGGAGAATGCTTTAAGAGCATGCTGCAGAGGCATCAAGATTGGGAAAATTCTTATTCATAGAGAAGGTGATAATGGTCAACAGCTAATATATGAGAAGTTGCCTAAAGATATCTCAGAGAGGCATGTGCTACTTTTGGATCCTATCTTAGGCACAGGTAATTCGGCTGTTCAAGCAATTTCCTTACTTTTAAGCAAGGGTGTACCAGAGTCCAACATTATATTTCTCAATCTCGTATCTGCACCTCTAGGTGTACATGTGGTGTGCAAAAGATTTCCAAGAGTAAAAATCGTGACATCTGAAATTGATATTGGTTTGAATGAAGATTTCCGTGTCATACCTGGCATGGGAGAGTTTGGGGATCGGTACTTTGGAACAGATGATGATGACAAGCTGGTGGTGACCCTTTCAAAGTATAAAATGGTTGAAATTTGA 1389 0.3988 MDSLEQRKGGTEKPTTSAIDMYKQPFIIGVAGGAASGKTAVCDMIIQQLHDQRVVLINQDSFYHNLTDEELLRVQDYNFDHPEAFDTEQLLHVMDKLKCGQAVDIPKYDFKDYKSDVFPARRVNPADVIILEGILIFHDPRVRALMSMKIFVDTDDDLRLVRRIKRDTAENGREIVAVLDQYSKFVKPAFDDFIFPTKKYADLIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYRNFYLIQSTFQIRSMHSLIRDHLTTKHDFIFYSDRLIRLVVEYGLGHLPFTEKQIITPNGSVYSGVEFSKKLCGVSIIRSGESMENALRACCRGIKIGKILIHREGDNGQQLIYEKLPKDISERHVLLLDPILGTGNSAVQAISLLLSKGVPESNIIFLNLVSAPLGVHVVCKRFPRVKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDDKLVVTLSKYKMVEI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3755g00022 462 Pfam Phosphoribulokinase / Uridine kinase family 27 213 IPR006083 GO:0005524|GO:0016301
Gabi3755g00022 462 SUPERFAMILY PRTase-like 228 445 IPR029057 -
Gabi3755g00022 462 PRINTS Uridine kinase signature 171 182 - -
Gabi3755g00022 462 PRINTS Uridine kinase signature 25 42 - -
Gabi3755g00022 462 PRINTS Uridine kinase signature 55 66 - -
Gabi3755g00022 462 PRINTS Uridine kinase signature 100 115 - -
Gabi3755g00022 462 PRINTS Uridine kinase signature 157 167 - -
Gabi3755g00022 462 PRINTS Uridine kinase signature 193 206 - -
Gabi3755g00022 462 NCBIfam uridine kinase 23 225 IPR000764 -
Gabi3755g00022 462 FunFam Uridine kinase 229 444 - -
Gabi3755g00022 462 FunFam Uridine kinase 22 228 - -
Gabi3755g00022 462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 218 IPR027417 -
Gabi3755g00022 462 PANTHER URIDINE KINASE 23 355 - -
Gabi3755g00022 462 Gene3D - 229 444 IPR029057 -
Gabi3755g00022 462 Gene3D - 21 228 IPR027417 -
Gabi3755g00022 462 CDD PRTases_typeI 305 417 IPR000836 -
Gabi3755g00022 462 Pfam Uracil phosphoribosyltransferase 243 444 - -
Gabi3755g00022 462 CDD UMPK 27 225 IPR000764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3755g00022 Gabi-Chr3755 95679 101849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3755g00022 1 447 PRT Gene Family AT4G26510 81.655 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3755g00022 K00876 - gmx:100798205 814.683