Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3755g00017 ATGCCGGGAACCCTAAATCTCACTCTCATCACCGGTGCTGGCAGAACACTTCGGCTCTCCTCCGAAGTCTCCTCCCTCTCCAGTAGGTTCGTCCGGCCTCCGATTATGGATTCCGCCAAACAATGCAGGCCAGCGATCCGGGCTTTCAGTGCGACGGTGTCGGCGATAGTTTCCCGGCGGCCGGCAAGTCTCTACGAGGTGCTCCGGATCAAGCAGAACGCGTCTTCCGTGGAAATCAAGTCGGCATACCGGAGCCTTGCGAAGATGTACCATCCTGATTCAGCGGTACGGCCGTCGGAATCCGACGAAAGGGACTTCATCGAGATCCACGACGCGTACGAGACGCTGTCGGATCCGTCGGCCAGAGCGCTCTACGATCTGTCGTTGATGGCCGCGCACGGTGGTAGGCGCTTGTTCTCGTCTTCGGTGGCTCCGAATGGCTCTTCCGGATTCTACCAGACCCGGAGATGGGAAACGGACCAATGCTGGTAG 492 0.5915 MPGTLNLTLITGAGRTLRLSSEVSSLSSRFVRPPIMDSAKQCRPAIRAFSATVSAIVSRRPASLYEVLRIKQNASSVEIKSAYRSLAKMYHPDSAVRPSESDERDFIEIHDAYETLSDPSARALYDLSLMAAHGGRRLFSSSVAPNGSSGFYQTRRWETDQCW 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3755g00017 163 SMART dnaj_3 62 121 IPR001623 -
Gabi3755g00017 163 CDD DnaJ 65 118 IPR001623 -
Gabi3755g00017 163 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 15 163 - -
Gabi3755g00017 163 Pfam DnaJ domain 64 126 IPR001623 -
Gabi3755g00017 163 SUPERFAMILY Chaperone J-domain 62 142 IPR036869 -
Gabi3755g00017 163 ProSiteProfiles dnaJ domain profile. 63 129 IPR001623 -
Gabi3755g00017 163 Gene3D DnaJ domain 56 139 IPR036869 -
Gabi3755g00017 163 ProSitePatterns Nt-dnaJ domain signature. 106 125 IPR018253 -
Gabi3755g00017 163 PRINTS DnaJ domain signature 65 83 IPR001623 -
Gabi3755g00017 163 PRINTS DnaJ domain signature 83 98 IPR001623 -
Gabi3755g00017 163 PRINTS DnaJ domain signature 101 121 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3755g00017 Gabi-Chr3755 64046 64767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3755g00017 65 126 C2H2 Transcription Factor Family AT1G74250 45.455 4.00e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3755g00017 - - gmx:100786034 201.445