Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3750g00062 ATGGAGCAGGAAGAGCACGAAGTGTATGGTGCAGACATTCCCGATGAGGAGGTTGAGATGGACGATATGAAGAAGAGGTTGAAGGAGATCGAGGAAGAAGCTAGTGCCCTTCGCGAAATGCAGGCCAAGGTTGAAAAAGAGATGGGAGCTGTTCAAGATTCGTCTGGCTCTTCTGCATCTCAAGCTGAAAAAGAGGAAGTGGATGCTCGATCGATCTATGTTGGTAATGTTGACTATGCATGTACACCTGAAGAAGTCCAACAGCATTTTCAGTCATGTGGAACTGTGAACAGAGTGACAATATTGACAGACAAATTTGGTCAACCAAAAGGATTTGCTTATGTAGAGTTTGTTGAGGTTGATGCTGTTCCGAATGCTCTCCTGTTAAATGAATCAGAATTGCATGGTCGACAACTAAAGGTGTCTGCTAAACGTACAAATGTTCCTGGAATGAAACAGTATTATGGAAGACGACCAGTTGGTTTCAGATCTAGGAGGCCTTTCATGCCTTCTCCATTCTATCCACCATATGGTTATGGTAGGGTCCCGAGGTATAGAAGACCCACGCGATTCAGGCCATACTAG 585 0.4462 MEQEEHEVYGADIPDEEVEMDDMKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGSSASQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVPNALLLNESELHGRQLKVSAKRTNVPGMKQYYGRRPVGFRSRRPFMPSPFYPPYGYGRVPRYRRPTRFRPY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3750g00062 194 CDD RRM_II_PABPs 71 142 - -
Gabi3750g00062 194 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 70 146 IPR000504 GO:0003723
Gabi3750g00062 194 SUPERFAMILY RNA-binding domain, RBD 61 170 IPR035979 GO:0003676
Gabi3750g00062 194 SMART rrm1_1 71 142 IPR000504 GO:0003723
Gabi3750g00062 194 Gene3D - 13 143 IPR012677 -
Gabi3750g00062 194 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 5 169 - -
Gabi3750g00062 194 MobiDBLite consensus disorder prediction 43 65 - -
Gabi3750g00062 194 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 72 140 IPR000504 GO:0003723
Gabi3750g00062 194 Coils Coil 13 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3750g00062 Gabi-Chr3750 595432 599370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3750g00062 71 142 Eukaryotic Initiation Factors Gene Family AT2G36660 36.842 1.13e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3750g00062 K14396 - gmx:100527545 317.39