Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3750g00051 ATGGCGGATGCACCAACAAGCCCAGCTGGGGGGAGTCATGAGAGTGGTGGTGAACAGAGCCCGCGTGGTTCTTCATCTGGTGCAAGGGAACAGGACCGTTACCTGCCAATTGCAAATATAAGCCGTATCATGAAGAAAGCATTGCCAGCGAATGGGAAGATTGCGAAGGATGCCAAAGACACCATGCAGGAATGTGTTTCTGAATTCATCAGTTTTATTACCAGCGAGGCGAGTGAGAAATGCCAGAAAGAGAAGAGAAAGACCATTAATGGAGATGATTTGCTATGGGCGATGGCCACCTTAGGATTTGAGGACTACATAGAGCCGCTTAAGGTGTACCTAGCAAGGTACAGAGAGTTAGAGGGTGACACTAAAGGATCTGCTAGAAGTGGTGATGGATCTGCTAGACGAGATCAAGTAGGCCTTGCAAGTCAAAATGCTCAGCTTGTTCATCAGGGTTCGCTGAACTATATTAGTTCCCAGGTGCAGCCACAGCATCTGGTTTTGCCTTCAATGCAAAGCCATGAATAG 531 0.4783 MADAPTSPAGGSHESGGEQSPRGSSSGAREQDRYLPIANISRIMKKALPANGKIAKDAKDTMQECVSEFISFITSEASEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRELEGDTKGSARSGDGSARRDQVGLASQNAQLVHQGSLNYISSQVQPQHLVLPSMQSHE 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3750g00051 176 PRINTS CCAAT-binding transcription factor subunit A signature 81 99 - -
Gabi3750g00051 176 PRINTS CCAAT-binding transcription factor subunit A signature 62 80 - -
Gabi3750g00051 176 PRINTS CCAAT-binding transcription factor subunit A signature 100 118 - -
Gabi3750g00051 176 FunFam Nuclear transcription factor Y subunit B-3 23 148 - -
Gabi3750g00051 176 Gene3D Histone, subunit A 21 157 IPR009072 GO:0046982
Gabi3750g00051 176 MobiDBLite consensus disorder prediction 1 32 - -
Gabi3750g00051 176 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 17 145 IPR027113 GO:0001228|GO:0006355|GO:0016602
Gabi3750g00051 176 SUPERFAMILY Histone-fold 31 153 IPR009072 GO:0046982
Gabi3750g00051 176 MobiDBLite consensus disorder prediction 123 143 - -
Gabi3750g00051 176 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 34 98 IPR003958 -
Gabi3750g00051 176 ProSitePatterns NF-YB/HAP3 subunit signature. 65 81 IPR003956 GO:0005634|GO:0006355|GO:0043565
Gabi3750g00051 176 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3750g00051 Gabi-Chr3750 485228 490822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3750g00051 7 170 CCAAT-HAP3 Transcription Factor Family AT2G37060 73.214 2.82e-82 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gabi3750g00051 CBFD_NFYB_HMF 1.1e-28 CL0012