Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3750g00025 ATGATGATGCAGAATCAGATTCGGAAGATGAAGAGTACCATAAAGGACAATGACCGGCTTAGTGACTTGCCTACCGCAATTCTGCTTCATATAATGTCATTTATGAAGATAAAAGATGCTGTTCAGACTTGCATCTTGTCAAAACGGTGGAAAGACCTCTGGAAATCCCTCCCTAATCTCACATTACATACCTCAGACTTTAGCAAGCCTTCTATTTTCTCTGAATTTGTGTCTGGGATTGTGTTATGCCGTGATGGCAACCATCCCCTGCATAATCTTGACTTCGATCGCCATGTTTCAAGTTATGATATCAAAAAAAGAACGAGAATCCCTAAGTCTCTCAACCTTCCAACATTAATAAGTTTGCATCTCGAGCATGTTGCAATTTCTGTCGATGACAGAGGTCATGCTGAACCCTTCTCAACTTGTAACAAGTTAAACACTCTGATCATAGATCATTTTGGCGTAGTCTCTCCTAACTCTTACATCCTACCAAAGTTAGGAATCCTCAATATAACCAATGCTACACTTGCCAATTTGACCATCAATGATACTTCAGATCGCAAAATTGTGATATCTACACCTAATCTAAGTTCTTTCTCCTTAAACGGTTCTCCTTTTCAAGCATTGTGTGGACAGGAAGGGAAGAATGTTTTTCATCGAAAGAGACTGAAGAAACTCTTGAGAGTCATAGAAAAGGAAACTGGGGCTGGAGAGAAGAAATTCATTGGTGGCAACAAAATTGGATTGGCAGACCTTGCATTGGGATGGATTGCACATACTTTGGTGGCCTTGGAAGATGTGGTTGGTGTCAAGTTAATCACATCTGATGCATTTCCTAACCTTCATTCTTGGGTGTTGAATTTCTTGGAATTTCCTACCACAAAAAACAATCTCCCACCTCATGAGCTAGCGGTTGAGTATTTCAGGGAAAAGAGGGAGATGTTTCTTTCAATGGCTACCATCACTAGAATATTGGAGTCAGGGACCTTTAAGCGTAGTTGA 1005 0.404 MMMQNQIRKMKSTIKDNDRLSDLPTAILLHIMSFMKIKDAVQTCILSKRWKDLWKSLPNLTLHTSDFSKPSIFSEFVSGIVLCRDGNHPLHNLDFDRHVSSYDIKKRTRIPKSLNLPTLISLHLEHVAISVDDRGHAEPFSTCNKLNTLIIDHFGVVSPNSYILPKLGILNITNATLANLTINDTSDRKIVISTPNLSSFSLNGSPFQALCGQEGKNVFHRKRLKKLLRVIEKETGAGEKKFIGGNKIGLADLALGWIAHTLVALEDVVGVKLITSDAFPNLHSWVLNFLEFPTTKNNLPPHELAVEYFREKREMFLSMATITRILESGTFKRS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3750g00025 334 CDD GST_C_Tau 222 311 IPR045074 GO:0004364|GO:0006749
Gabi3750g00025 334 SUPERFAMILY F-box domain 17 97 IPR036047 GO:0005515
Gabi3750g00025 334 SUPERFAMILY GST C-terminal domain-like 213 316 IPR036282 -
Gabi3750g00025 334 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 184 315 IPR010987 -
Gabi3750g00025 334 Pfam Glutathione S-transferase, C-terminal domain 221 291 IPR004046 -
Gabi3750g00025 334 PANTHER OS11G0201299 PROTEIN 13 203 - -
Gabi3750g00025 334 Pfam F-box domain 20 57 IPR001810 GO:0005515
Gabi3750g00025 334 CDD F-box_AtFBL13-like 20 55 - -
Gabi3750g00025 334 Gene3D - 203 320 - -
Gabi3750g00025 334 SMART fbox_2 23 63 IPR001810 GO:0005515
Gabi3750g00025 334 Gene3D - 3 60 - -
Gabi3750g00025 334 ProSiteProfiles F-box domain profile. 17 65 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3750g00025 Gabi-Chr3750 267698 270424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3750g00025 211 314 Glutathione S-transferase Gene Family AT2G29420 33.654 1.18e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3750g00025 - - aprc:113871681 211.46