Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3750g00019 ATGCCAGGCTATCCTGTTGCAGCTTGTGAAACAACATATTCTATAGGCACAGATCAACCAAGCCATCGAGACGCTTCTGTGCATTTATCTGCGGAAGAGGAGCTTGCTGCAGAAGAGAGTCTTTCAATTTATTGCAAGCCTGTAGAGTTCTACAACATTCTTCAGCGACGTGCTATACGAAATCCATCATTCCTTCAGAAATGTTTAGACTACCAGATAAAGGCTAAGAACAAGAAAAGGATAAAAATGACAGTTTCATTGTCATGGAGTGTTGATGAAACTCAGACTGTGTTTCCTCTGCATATCTGTCTGGCAAGGCTGAATCCTAATAATAAAGATGCAGAGTATTCTGCTGTTTACCGAACCAGTCGGTTATTCATCTTTCATGAGTCCTCTGGAATTGATGGAAATACTCTAGTCCGAGCAAACTTTACGCTCCCTGAAGTTAAAAAGTTAGCTGTGGAGGCTAGGGCTGACTCAATTGCTATCTTGTTTTTCACCACTGTGGAAAACCCAAATTCATCATCTGGAGTCAATGCAAGCCTGGTGCCATTGGATTTGACTTCTTATGAATCAAGAGTTGGGAAGTACTGCTTATGTGGGAAAGTATCTTTGCAATCACTTTATATGGCTTGGGATAGTTCTCCAAATTTTAGGTTGGGACAGCGAGCTGAGATAATGTCTACTGTTGATTTGCTTCCATGTATTTTGAAGTATGAATTTCTAAATAAGGGCGGGAGCGTCTCAGTTCAAGACCTCTGTAACTCTGAGAATGTGAGTACATCCAAGCAAGTTCAAATCACAATTTCTGCCGAAGAGTTTGGGGCCAAGGACAAATCTCCCTACCATACACATGCAAGCAGTGAAGTATCGTCGTCATCATTATCTCGTATCATGCGGTTGAAAGAAGGAAATGTCATGTTTAATTACAGGTATTACAATAATAAGTTGCAGAGAACGGAAGTTGTTGAAGATTTCTGCTGTCCATTCTGTTTGGTTAAATGTGCAAGCTATAAGGGTCTAAGATATCACTTGTTCTCGTCACATGATCTTTTCAACTTTGAATTTTCGGCATCGGAGGATTGTCAGGTTGTAAATGTGTCTGTAAAAACTGATAACTGGAGATCTGAGATTGTTGCAGATGGTGTTGATCCAAAAGTACAAACTTTCATCTATTGTGCCAAGCCACTTAAGCGCAGAAGTTCGGAGAATGAATCTTCTGAAAATGTGAAGGATGCCGAGTCACTGCTCTTAGAGTCTGAAATTCCTGCAGACCCACTGCTCTTAGAGACTGAAATTCCCTCAGAACCATTGCTCTTAGAATCTGAAATTCCTGCAGACCCACTGCTCTTAGAATCTGAAAATCCTGCTGGAGAAACTGAGCTTTTGGAGAAGGCTGATGGGGTTTCAAATGCTATTATTCAATCAAATCCTGATCCAGATTGTGTCCCACCAATATCTGAGCATGATCATGGCACTTCTGCAGTGCGACGGGTTGCCAAGAGAGGGAAGTTACAAGTGGAGCATTCTGACTCACGAAACACTGACCTGTTGAGAAAGCGACAGTTTTATCACTCTCGCAAAGTCCAGCCAATTGCACTTCAAGACGTTCTATCTGGTGAAGACAGTGAGAATGAAATTGATGAAGAAGTTGCAGGCATTGAAGAACGAAGGATGCTTGGTAATTTTATTGATTTGAACGACGATGAGAAGCGACTCATGCATATATGGAACTCATTTACTCGGAGGCAAGGCGTGCTGGCAGATGGTCACGTTCCTTGGGCATACGAGGCTTTCACAAAATTGCATATCGTTGAGCTTGTCAAATCCACCAGTTTTGCTTGGCATTGGAGACTGTTTATGATCAAACTATATAATCATGGTCTTCTAGATGCGCGAACCATGAATGAATGTAGTATAATTTATCAAGATCACTACAATGCTGCAAAATCAGATCGCAATAGGCAGAATTCAGATCCCAATAGGCAGAATCCAGATCCCAATAGGCAGAATCCAGATCCTAATAGGCAGAATCCAGATCCTAATATGCAGAATCCAGATCCCAATAGGCAGAATTCAGATCCTAATAGGCAGAATCCAGATCCCAATAGGCAGGATCCAGATTCCAATATGCAGAATTCAGATCCCAATATGCAGAATCCAGATTCCAATATGCAGAATTCAGATCCCAATAGCTAA 2199 0.4152 MPGYPVAACETTYSIGTDQPSHRDASVHLSAEEELAAEESLSIYCKPVEFYNILQRRAIRNPSFLQKCLDYQIKAKNKKRIKMTVSLSWSVDETQTVFPLHICLARLNPNNKDAEYSAVYRTSRLFIFHESSGIDGNTLVRANFTLPEVKKLAVEARADSIAILFFTTVENPNSSSGVNASLVPLDLTSYESRVGKYCLCGKVSLQSLYMAWDSSPNFRLGQRAEIMSTVDLLPCILKYEFLNKGGSVSVQDLCNSENVSTSKQVQITISAEEFGAKDKSPYHTHASSEVSSSSLSRIMRLKEGNVMFNYRYYNNKLQRTEVVEDFCCPFCLVKCASYKGLRYHLFSSHDLFNFEFSASEDCQVVNVSVKTDNWRSEIVADGVDPKVQTFIYCAKPLKRRSSENESSENVKDAESLLLESEIPADPLLLETEIPSEPLLLESEIPADPLLLESENPAGETELLEKADGVSNAIIQSNPDPDCVPPISEHDHGTSAVRRVAKRGKLQVEHSDSRNTDLLRKRQFYHSRKVQPIALQDVLSGEDSENEIDEEVAGIEERRMLGNFIDLNDDEKRLMHIWNSFTRRQGVLADGHVPWAYEAFTKLHIVELVKSTSFAWHWRLFMIKLYNHGLLDARTMNECSIIYQDHYNAAKSDRNRQNSDPNRQNPDPNRQNPDPNRQNPDPNMQNPDPNRQNSDPNRQNPDPNRQDPDSNMQNSDPNMQNPDSNMQNSDPNS 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3750g00019 732 CDD VEFS-box_EMF2-like 518 645 - -
Gabi3750g00019 732 MobiDBLite consensus disorder prediction 660 732 - -
Gabi3750g00019 732 Pfam VEFS-Box of polycomb protein 505 640 IPR019135 -
Gabi3750g00019 732 CDD ZnB-Zn_EMF2-like 300 374 - -
Gabi3750g00019 732 PANTHER POLYCOMB GROUP PROTEIN 28 647 - -
Gabi3750g00019 732 MobiDBLite consensus disorder prediction 649 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3750g00019 Gabi-Chr3750 163450 190499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3750g00019 1 638 C2H2 Transcription Factor Family AT5G51230 49.065 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3750g00019 - - gmx:100798991 733.791