Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3750g00016 ATGACCGATGCTACACTAACCGAGCAGTGGAGCGACTTGCCGTTTATGATCAACGACGCTGACGACATGATCGTCTTCAACTCCCTGAACGACGCCGTTTCACACGGTTGGTCTCCATCCGATTACACAACACCAAAACCGGAACCAAACGACGGTCCAAACGCCGTCGTTTTGCCGCATAAGGAGAAAAATAAGAGCTTGGGAACGCACTACAGAGGAGTGAGGCAAAGACCGTGGGGAAAGTTCGCGGCTGAGATTCGCGACCCGGCTCGGAACGGCGCGAGGGCGTGGCTCGGCACTTACGAAACGGCTGAGGAAGCCGCTTTGGCTTATGATCGAGCAGCGTTCCAGCTTCGCGGCTCTAAGGCTTTGCTGAACTTCCCGCACCGAATCGGTTCCGGAGATCCGCCTCCGGTCAGAGTCACGGCTAAGTACCGCAGTGGCGCGCCGCCAGCTACGGCTGTTAATGGCGGCTCGCGCAAGAAACTGAAAGGACCCGCCGCAAGTGAAGTGTTGCCAGCTGGCGAGTAA 531 0.5744 MTDATLTEQWSDLPFMINDADDMIVFNSLNDAVSHGWSPSDYTTPKPEPNDGPNAVVLPHKEKNKSLGTHYRGVRQRPWGKFAAEIRDPARNGARAWLGTYETAEEAALAYDRAAFQLRGSKALLNFPHRIGSGDPPPVRVTAKYRSGAPPATAVNGGSRKKLKGPAASEVLPAGE 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3750g00016 176 Pfam AP2 domain 69 120 IPR001471 GO:0003700|GO:0006355
Gabi3750g00016 176 Gene3D AP2/ERF domain 69 130 IPR036955 GO:0003700|GO:0006355
Gabi3750g00016 176 FunFam Ethylene-responsive transcription factor 2 69 129 - -
Gabi3750g00016 176 CDD AP2 69 129 IPR001471 GO:0003700|GO:0006355
Gabi3750g00016 176 PANTHER DNA-BINDING DOMAIN 60 142 IPR044808 GO:0003700|GO:0009873
Gabi3750g00016 176 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Gabi3750g00016 176 PRINTS Ethylene responsive element binding protein signature 110 130 IPR001471 GO:0003700|GO:0006355
Gabi3750g00016 176 ProSiteProfiles AP2/ERF domain profile. 70 128 IPR001471 GO:0003700|GO:0006355
Gabi3750g00016 176 SMART rav1_2 70 134 IPR001471 GO:0003700|GO:0006355
Gabi3750g00016 176 SUPERFAMILY DNA-binding domain 70 130 IPR016177 GO:0003677
Gabi3750g00016 176 MobiDBLite consensus disorder prediction 145 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3750g00016 Gabi-Chr3750 155794 156475 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3750g00016 1 153 AP2-EREBP Transcription Factor Family AT2G44840 54.248 1.32e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi3750g00016 AP2 7.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3750g00016 K09286 - gmx:102664672 199.134