Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi3750g00001 | ATGGCAGGAAACTTCAGATTCACAATGGACCAGAAGGATATTGTTAGATTCTTGACTACAACTGTTGATAGTTTCATTCAGGATCGGTTAATCAACAAAGAACAAAGAACCCAACACAAAGAACAGTGTGCAGAGAGGTTAGCAGCTGAAGATGGAAGTTGTGACAAAGACACTGAGGTGGAGTACTCTGATCAAGCAGTATTAGCAAATCTGGATTGGGGTATTGAAGCCCTTGAAGAAGCTATCAATACATATAATATGGAAACCAAGCTTGCAAGACTAGATTATGCTGAGAAGATGTTGCAAGTTTGTGCAATGTTGAATCCTAAACAAAAAACTGCTGGAGTTCCAAACTTCTACCTCTCAGCTTGGGCACACTTAAATCTATCCTTCCTATGGAAGTTGAGGAACAATATTAAGAATTGTATTTTTCATGTTCTTGAGATGTTTATTGTTGATCCTTTTTTCTCTCGGATTGACTTTGCTCCTGAACTATGGAAAAACCTGTTTCTTCCACACATGAGCTCAATTGTGGGGTGGTATTCAGAGGAGAGGCACAAGCTTATGATGGAAGTGATACCTGACTCTTCTGATTTGTCCTTTACAGCTGATTTTGATCAATTTTTCAATGAGTCTTTTGTATTTTCTATGAGGCCACATCAATTAGATAAATTGCAAAAGCTGGAACAGCTTTATGGAGAGTCATTGGATGAAAACACAAGGCTATATGCAAAATATTATAACGATTGCATGAACTCTGATTCCAATTCAAGCAAGAAGGTGGTTCCTATGTTTCCAATTGTTGAGCCCCCAATGACTCCTTTGCATGAGTTGAGCATGTCTATTCCTGATTATGTAAAATTTGGTCCTATTTTGCCCAAGAGTGCAGGGTTTTCCTTGACATCAAGAGCTAAAGATGGTGTAAATGAAACAATTAGAGAGAATTTAACTTCCAGCCATTCAAAGGTGGAGAAATCATCCATATGGGGTGCTAAGGAGAGCATCATTGAAGAGAATGAAGATGATTCAGATTCTGAGCTTGATGATGCATCTGTGGATTCTGATAACAAAAACAATGTTTTCTCACCTGGAAAGGAGATGATCAAGGATGAGGATACTGTGCCAAAAGTGCATCTATCAAACAATAAGAATCAAATACATTCTCCTAATATTTCTCCCTTAGATTCCCCAAGAACTGCTCCAAATAACTCATCCACAAATCCTGATATTCGAAGTAAAAGAGAAACCAAGTCTTTGCGCTTACTGTCTAGTCGTTTCAGGGACTCGACTATTTCTGACTCTCTATCATTATCTCCAGACATGAGCACTGATCACAATTTCAACTCTGATAACGAAGTGATGGTTTTGAAGAATAATCAGAGGAAAAACTATAACCAAACACCAAGTATGAATCATGACAATGAGAATAACCCGGTACTTAATGACAGTTCCCTTTGTGAAAGTGATGATGGATATCAAAGCAGCATTTCATTATCAAAATTAGAGAAGCTAACTATTGGATCAAAACCACCCAAAGATTTTGTTTGCCCAATCACAGGTCAGATATTTTGTGATCCTGTCACCCTTGAAACAGGCCAGACCTTTGAAAGAAAAGCAATTCTAGAGTGGCTCAAAACAGGAAACACAACATGTCCCATCACACGACAGCTTCTATCTGCAAGCACATTACCCAAAACAAACTATGTTTTGAAGAGATTAATAACATCTTGGAAAGAACAGCATCCTGAACTAACTCAAGAATTCTCCAATTCTAACACACCAAGGGCTTCTTCCTGTTCTCCAGCTGCAAAAGACATCCCAATGCTCTCCCTTACACAAAGAACAACTGATTCACCAAGTCACAAGAACAAAGGAGATTATATTAAACAAAGGAGCAAAAGATTTATGCGGGTTGCTGTGGCAACATCTCCAACTAGTGTGCTATCTCAAGCTGCAGTAGAAACAATTATGAATTCCTTGAAACCTTACATTTCAAGTCTTTGTACATCAGAAAACCTGCAAGAATGTGAAGAAGCTGTATTGGAAATAGCAAGATTATGGAAAGATTCACAGACTGATCCTCAGATTCATTCTTATTTATCAAAGCCAACTATCATAAGTGGTTTAGTGGAAATACTTTCAGCTTCTGTGAATAGAGAAGTTCTGAGAACATCAATTTATATTCTTTCCGAGCTAATTTTCGCAGATGAAAGTGTTGGAGAAACACTTAACAGTGTAGATTCTGATTTTGATTGCTTGGCTACTCTACTCAAGAATGGTTTGGCTGAGGCTGCTCTTCTTATTTATCAAATAAGGCCAGTTTTTGCTCAGCTTTCAGCACATGAACTTATACCCTCTCTTGTCCAGGTGATCCAGAACAAAAGTGAAGAGTTAGATGATTTTCAGTTAGTTATAGACCCAAAAGATGCTTCCTTAGCAATTCTTGAGCAAATTTTAATTGGAGGGGATGAATATAGCAGGTCCCTTAATGCTTTGAGTGTTATTTCAGCAAATGGAATTCCAGCCTTAGCAAAGTATTTGGAGAGGATGGAAGGAAGGAGGTCTGTTGTTTCCATACTTTTGTGTTGTATGCAAGTTGAAAAAGGTTGCAAGAGCTTAATAGCAAGCAGAATAGAATTATCTCCTGTTCTTGAATTATTTCATGCTGGAAATGATAGTGTGAGAGGCATCTGTGTGGAGTTTCTCTCAGAACTGGTTCAGTTGAATAGAAGGACGTTCTGCAACCAGATATTGCAGATAATCAAGGATGAAGGAGCATTCAGTACAATGCATACATTTCTTGTATATCTTCAGATGGCTCCAATGGAGCATCAACTTGCTGTTGCCAGTCTTCTTCTTCAGCTTGATCTTCTGGTTGAGCCACGAAAGATGAGCATTTACAGGGAAGAAGCTATAGAGACACTCATAGAAGCACTTTGGCAAAAGGACTTCTCAAATACTCAAATGAAGGCTTTAGATGCTTTGCTATTTCTTATAGGACATGTCACTTCCTCAGGAAAGTCATATACTGAAGCTTGGTTGCTCAAGACTGCAGGATTTGATCAACCTTACAATGCTTTAATGAAGGCCGAGCAGTCGGGACAGTATGACAATGATTTGATGGAAACAATGGAGGATGAGAAAAATGCTATGAACTCTTGGCAGAAAAGGGTAGCTTTTGTACTTTGCAACCATGAAAATGGTTCAATATTTCAAGCTTTGGAAGAATGTCTAAGAAGTAACTCCTTAAAGATGGCAAAATCTAGCCTTGTTCTTGTTACATGGCTTACACAGATGCTCCCTACTCTTCCTGATACTGGTGTAAGGGAAGTTGCTCGCAAGTCCTTGCTTGAAGAACTTATAAATGTCCTCCAGTCATCCAAGAACCTGGAGGAAAAGATCCTTGCTGCCCTAGCTTTAAAGACTTTCATTAGTGATCCAATTGCTCAAGAAGCACTTGGAGTTTATGCTAAAAGCATCTATAGAACTTTGAGGAAGCTGAGGAAATATTCAGTGGTGGCAGTTGATATTATGAAAGCCTTACTAAACTTGAAATCTGTTGATGTGACAGAGTTGTGGAGTTGTAAAGAAGTTGTTGAGTTAGATTTGAGCTCAAATGGTGAGGTGCTTTCTTTGCTTTACCTGAACGGTCAGGTCTTGAGTGGACACTCAGATGGAACTATCAAGGTATGGGATACAAGGAAGAGAATACCAAGAGTGATTCAAGAAACTCATGAGCACACAAAAGCAGTAACATCTCTCTGTTCTTCAGTTGATAGACTTTACAGTGGCTCCTTAGACAAAACCATCAGGATTTGGACGATTAAACCAGATGAGATTAAATGTATAGATGTTCATGATGTTAAGGAGCCAGTGTATGAGCTGACAGCCAATGCTAAATTGGCATGCTATGTATCTCAAGGAACTGGAGTTAAGGTTTTCAATTGGTCTGAGGCTCCAAAGCTCATCAATTTCAACAAATATGTGAAATGCCTTGCTGTTGCTGGGGACAAACTGTATTGTGGTTGCTCTGGTTACAGCATTCAGGAGGTTGACTTGTCCAAATATACATCAAATTCATTCTGCTCTGGTACAAGAAAATTGTTGGGAAAACAAACCATACACTCCCTTCAAATTCATGATGGTTTCCTCTTTGCTTGTGGTTCTTCTGTTGATGCAACTGCAGGAAAGGTATTTTCACTTTCCACCAAAATGGTAGTGGGATCACTCTCAACTGGACTTGATATCCATCGCATAGCCATCAACAGCGACTTCATATTTGCTGGTACAAAATTTGGCACCATTGAGGTTTGGCTAAAAGATAAGTTCACCCGGGTTGCTTCCATCAAAATGGCTGGTGGTCACACAAAAATCACATCATTAATATCAGATACAGATGGTATGATGCTTTTTGTTGGTTCCTCTGATGGCAAGATTCAGGTTTGGGCTTTGGATTAA | 4458 | 0.3892 | MAGNFRFTMDQKDIVRFLTTTVDSFIQDRLINKEQRTQHKEQCAERLAAEDGSCDKDTEVEYSDQAVLANLDWGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQKTAGVPNFYLSAWAHLNLSFLWKLRNNIKNCIFHVLEMFIVDPFFSRIDFAPELWKNLFLPHMSSIVGWYSEERHKLMMEVIPDSSDLSFTADFDQFFNESFVFSMRPHQLDKLQKLEQLYGESLDENTRLYAKYYNDCMNSDSNSSKKVVPMFPIVEPPMTPLHELSMSIPDYVKFGPILPKSAGFSLTSRAKDGVNETIRENLTSSHSKVEKSSIWGAKESIIEENEDDSDSELDDASVDSDNKNNVFSPGKEMIKDEDTVPKVHLSNNKNQIHSPNISPLDSPRTAPNNSSTNPDIRSKRETKSLRLLSSRFRDSTISDSLSLSPDMSTDHNFNSDNEVMVLKNNQRKNYNQTPSMNHDNENNPVLNDSSLCESDDGYQSSISLSKLEKLTIGSKPPKDFVCPITGQIFCDPVTLETGQTFERKAILEWLKTGNTTCPITRQLLSASTLPKTNYVLKRLITSWKEQHPELTQEFSNSNTPRASSCSPAAKDIPMLSLTQRTTDSPSHKNKGDYIKQRSKRFMRVAVATSPTSVLSQAAVETIMNSLKPYISSLCTSENLQECEEAVLEIARLWKDSQTDPQIHSYLSKPTIISGLVEILSASVNREVLRTSIYILSELIFADESVGETLNSVDSDFDCLATLLKNGLAEAALLIYQIRPVFAQLSAHELIPSLVQVIQNKSEELDDFQLVIDPKDASLAILEQILIGGDEYSRSLNALSVISANGIPALAKYLERMEGRRSVVSILLCCMQVEKGCKSLIASRIELSPVLELFHAGNDSVRGICVEFLSELVQLNRRTFCNQILQIIKDEGAFSTMHTFLVYLQMAPMEHQLAVASLLLQLDLLVEPRKMSIYREEAIETLIEALWQKDFSNTQMKALDALLFLIGHVTSSGKSYTEAWLLKTAGFDQPYNALMKAEQSGQYDNDLMETMEDEKNAMNSWQKRVAFVLCNHENGSIFQALEECLRSNSLKMAKSSLVLVTWLTQMLPTLPDTGVREVARKSLLEELINVLQSSKNLEEKILAALALKTFISDPIAQEALGVYAKSIYRTLRKLRKYSVVAVDIMKALLNLKSVDVTELWSCKEVVELDLSSNGEVLSLLYLNGQVLSGHSDGTIKVWDTRKRIPRVIQETHEHTKAVTSLCSSVDRLYSGSLDKTIRIWTIKPDEIKCIDVHDVKEPVYELTANAKLACYVSQGTGVKVFNWSEAPKLINFNKYVKCLAVAGDKLYCGCSGYSIQEVDLSKYTSNSFCSGTRKLLGKQTIHSLQIHDGFLFACGSSVDATAGKVFSLSTKMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLISDTDGMMLFVGSSDGKIQVWALD | 1485 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi3750g00001 | 1485 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 1451 | 1485 | - | - | |
| Gabi3750g00001 | 1485 | Gene3D | - | 650 | 1189 | IPR011989 | - | |
| Gabi3750g00001 | 1485 | ProSiteProfiles | U-box domain profile. | 509 | 584 | IPR003613 | GO:0004842|GO:0016567 | |
| Gabi3750g00001 | 1485 | MobiDBLite | consensus disorder prediction | 334 | 418 | - | - | |
| Gabi3750g00001 | 1485 | SMART | WD40_4 | 1442 | 1483 | IPR001680 | GO:0005515 | |
| Gabi3750g00001 | 1485 | SMART | WD40_4 | 1194 | 1232 | IPR001680 | GO:0005515 | |
| Gabi3750g00001 | 1485 | SMART | WD40_4 | 1237 | 1274 | IPR001680 | GO:0005515 | |
| Gabi3750g00001 | 1485 | SUPERFAMILY | ARM repeat | 656 | 1011 | IPR016024 | - | |
| Gabi3750g00001 | 1485 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 498 | 593 | IPR013083 | - | |
| Gabi3750g00001 | 1485 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 1451 | 1485 | IPR001680 | GO:0005515 |
Showing 1 to 10 of 29 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gabi3750g00001 | - | - | gmx:100776142 | 2563.1 |
Showing 1 to 1 of 1 entries