Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi374g00010 ATGGATCTTTTTGATGATATTCTACCTGTAGCTCCTCCTGCACGAGCTCGGCCGGGTGGTAAGTTTATCCCTAAGGCCAAACCGAAACAGCTGCCTCGAAAGGAAATATCTGCATCAGAACATGCAACCTCATCTAAAGATGGAAAGAATGTGCCTGTTACTTCATCATCTACCTGCTCAGAAGGAATTTCTTTGAATGAATGTCATAATGCAGTTGCTTCAACTTTAAGTATGTCAGCGGAAGAACATACGAGGTCTAATCATCGTCCACAGGTAGAACATCCAAATTTGGAGGATGCCACAAATTCTGAAATGGGAAATCCTCAACAAGTTAGTGAAAATGGAGATGCTGCAGCTTTAGTTGATGCTCTGCCTTCCACGATGACGGCCTCTGAAGTCGATGCTGATCGGAATCTTACACACTTTCCAAAATCAGCATGTGAGGCAGATCCTGTAGGTTTTGATGTGGGCCGAGTCGCTAACTCCATTCCTGAGTCCAGCCTCAACAACGGCACAACACAATCAGTTCACCCTGCTAATCCTGTAGAAAATGAATTGAGTAGCGTGGCTGCTCCATCTACATCTTGTTCAACCATAGGTAGGATGGAAGATGCACCAAAAACTGGGGAAGATTCATTTCTTGATAACAACAAACATTTGGAACTTATTGATAATTCATTGCAAGTTTGCCCAGATGTGGGCTTCCAAATTGCTTCAGATAATAAGGATGCAATATTTGATAGCAATATTCATTCCAATTTTAGTTTTGCAAGAGAACAAGAGGTAGTGTCTATGGAGTTTGGATTGGATCCTTTCAGTAACACCCTCCCGGATCCTGGCACTAGGAATGCTCGTAAGTTTCAACCCAAGATTAAGCCACGACCCAGAGTAGGCAATACAACAATTATTGCTTCTGCTTCATCTAGTGTTATGATGGAAAAATCTGTTGAGTTGCCTTCATGCACAAATGAAGTTCAACCTTTTCAATCTAGTGGTGATGGCAATGTCTCTGAAGACAACAGAAGCTTGACAACAGTAATTCCTTCCCAACTGGATTCCCTGAATGCTATGCTTTCAGAGGTTGCAGTTCATAATGGAAGTAGAGATTCGCCTTCTAGTTTTGGTAAATCAGCTGGAGAGACTGCAGACATTTTCTCTGGGTTGGAAACCCTTGATTACTTTCTCACCCAAAATGCCACTGATACAGGAAAACCAGCTCTTCATTCTTTCAATGAGAAGGGTTCAGAGGAAAATTTTGTTGTTCCAGCTTGTAGTTCTATTAATTCTTTTGGGGCATGTGATACTGCCCAAGTTCAAACGTGTCCAGAGTATCACACCACCCAAGATTCATTAACCTTCAATGAAACTGAAGTCCTCAATGTGAATGATACTCACTCTAACAATAGAAAGCCAGAAACAGAGAATGTTGTGGACCTGAATCCTGCCAGCCCTGTTGACAATGTCTTTGATTATCAATCCATGAAATCTGGCACAGACCCAACTTCTGAAATTCCAGTGCATGAAGAACTGACAAATGCTGCCGATAGTCCCACATTGGCTGATATTCTGCATGCAGATGTTACTGGGGAAAAAGAAGATGCTAATGAGAGAAAAAAAGATGGCACAATTTCAAGTTCTCCAAGGAAGCGTAGAAGATCTTCTATTGCTAATGAAGAGGATAAAAATGGTAAAACCTCAAGGCAGCTGAGGAAACAAGCATGTCGCAAACCTGCCAACAACTCGTTGAATGAGGATGAGGATGACCTTGACCCCCTTTCTGATTCTAATAGAGATGAACTTGAAGAAAATGATGATGAATTTGAAGTGGATTATTCATCCAATAAGAAAAGGGCATCAGCAAGTTCAAAGAAGAAATCTGTTGCTAAAACTGCAAAAACGTCTCAAAAGCGTAAAAAGGCTAATGATGATTCAGAAAAAACTACTAAAGAACCTCCTAAAAAGTTTTCTCATTCAACCAGACGGAGAAAAAGATGTGTGGACAAGGCTCTGCTGGAAATTCCTGAAGATGAACTGGATCCTCGAACATTGCCTATTAAGGATATTATTTTACTTGCAGAACATAGGGAACGGCGGGCGAAAAAGGAGGCAACAACTTCAAAAGCATTTTCCACCAATCAAAGCGGTGGAGATTCCCTTCATGAGGCTGGTGCTAATAATGAAGAGGAGACCTTAGGTTCAGAAGATGGTAGAGACACCGGCGATGATCAAGCCAGTGAGAGTATTCCATTTGCTTCGTCTTTATTCAATTACCAGTCTTTCATGGACAAGGCACCTAGGGGAAAATGGTCAAAACAAGATACTGAACTGTTTTATGAGGCTATTAGGCAGTTTGGCACAGATTTTTCTATGATACAACAGCTTTTTCCTGGTCGAACACGTCATCAGGTTAAGTTGAAGTACAAGAAGGAAGAGCGCCAGCATCCTTTACTGTTATCTGATGCTGTAAATAATCGTGCTAAAGATCACTATCATTTTAAATTGGTGATTGAGCGACTGCAACAAGCTTCCACAAAGGCAGAAAAAGACCCCGGCAGAGATGCTTCAGATTTCATGACTGGGGAGGAGGTTGAGGACTTGACACCTGGAACTAATGAGGAGGTTGCAACAACTCAGCAAGACGAGATTGCGACAACTCAGAAAGACAAGATTGCGACAACTCAGCAGGACGCCCATGTCAAAGATCAGGAAGATTGTATGGCTTTCAAAGATGATAGTGATGATAGTGATGATGAATTTCAAAGATGGTCTCAGTATAAAAGTGATTATTAA 2790 0.4151 MDLFDDILPVAPPARARPGGKFIPKAKPKQLPRKEISASEHATSSKDGKNVPVTSSSTCSEGISLNECHNAVASTLSMSAEEHTRSNHRPQVEHPNLEDATNSEMGNPQQVSENGDAAALVDALPSTMTASEVDADRNLTHFPKSACEADPVGFDVGRVANSIPESSLNNGTTQSVHPANPVENELSSVAAPSTSCSTIGRMEDAPKTGEDSFLDNNKHLELIDNSLQVCPDVGFQIASDNKDAIFDSNIHSNFSFAREQEVVSMEFGLDPFSNTLPDPGTRNARKFQPKIKPRPRVGNTTIIASASSSVMMEKSVELPSCTNEVQPFQSSGDGNVSEDNRSLTTVIPSQLDSLNAMLSEVAVHNGSRDSPSSFGKSAGETADIFSGLETLDYFLTQNATDTGKPALHSFNEKGSEENFVVPACSSINSFGACDTAQVQTCPEYHTTQDSLTFNETEVLNVNDTHSNNRKPETENVVDLNPASPVDNVFDYQSMKSGTDPTSEIPVHEELTNAADSPTLADILHADVTGEKEDANERKKDGTISSSPRKRRRSSIANEEDKNGKTSRQLRKQACRKPANNSLNEDEDDLDPLSDSNRDELEENDDEFEVDYSSNKKRASASSKKKSVAKTAKTSQKRKKANDDSEKTTKEPPKKFSHSTRRRKRCVDKALLEIPEDELDPRTLPIKDIILLAEHRERRAKKEATTSKAFSTNQSGGDSLHEAGANNEEETLGSEDGRDTGDDQASESIPFASSLFNYQSFMDKAPRGKWSKQDTELFYEAIRQFGTDFSMIQQLFPGRTRHQVKLKYKKEERQHPLLLSDAVNNRAKDHYHFKLVIERLQQASTKAEKDPGRDASDFMTGEEVEDLTPGTNEEVATTQQDEIATTQKDKIATTQQDAHVKDQEDCMAFKDDSDDSDDEFQRWSQYKSDY 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi374g00010 929 MobiDBLite consensus disorder prediction 274 295 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 463 484 - -
Gabi374g00010 929 Gene3D - 769 831 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 186 212 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 870 892 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 893 907 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 584 608 - -
Gabi374g00010 929 SUPERFAMILY Homeodomain-like 767 815 IPR009057 -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 528 567 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 843 929 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 635 654 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 843 859 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 618 634 - -
Gabi374g00010 929 CDD SANT 768 809 IPR001005 -
Gabi374g00010 929 FunFam Predicted protein 769 848 - -
Gabi374g00010 929 SMART sant 765 813 IPR001005 -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 705 720 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 186 201 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 78 110 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 43 61 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 96 110 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 665 679 - -
Gabi374g00010 929 Pfam Myb DNA-binding like 759 842 IPR039467 -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 697 745 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 1 61 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 914 929 - -
Gabi374g00010 929 ProSiteProfiles Myb-like domain profile. 761 811 IPR001005 -
Gabi374g00010 929 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 929 - -
Gabi374g00010 929 ProSiteProfiles SANT domain profile. 768 812 IPR017884 -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 28 42 - -
Gabi374g00010 929 MobiDBLite consensus disorder prediction 528 679 - -
Gabi374g00010 929 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 761 817 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi374g00010 Gabi-Chr374 66728 75200 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi374g00010 Myb_DNA-bind_7 2.6e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi374g00010 K15198 - gmx:100792788 1041.18