Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3749g00051 ATGTTATCGGAGTTGATGAACACTTTTAGGTCCTGCTTTTGGCCGGGTTCGGGTGGATATGCAGGCACAGGTTCAGATGCTGTAGGTAGACAGGATGGACTATTATGGTACAAAGACTTGGGGCAGCACCTGAATGGTGAATTTTCGATGGCTGTAGTTCAAGCCAATAACTTGCTTGAGGATCAGAGCCAGATTGAATCAGGGAGTTTGAGCTCCAATGAGTCTGGCCCTTTTGGTACCTTTGTTGGTATCTATGATGGGCATGGAGGGCCTGAGACATCGCGGTTTATCAATGATCACTTATTTCACCATCTCAAGAGATTTACTTCAGAGCAACAATCAATGTCGATGGATGTAATTCGCAAGGCATTCCAAGCAACAGAAGAGGGGTTTACGTCATTGGTTGCTAGACAGTGGCTAATGAAACCACAAATTGCTGCTGTTGGATCATGCTGTCTTGTTTGTGTTATTTGTAATGGAACCCTTTTTGTAGCGAATCTTGGTGATTCCAGGGCTGTTCTGGGAAGAGTAGTCAAGGCAACTGGCGAGGTTTTAGCCATGCAATTATCAACAGAGCACAATGCATCAATAGAGTCTATAAGACAGGAGCTGCATTCTTTGCACCCTGATGATTCAAATATTGTTGTTTTAAAGCATAATGTATGGCGTGTGAAGGGCCTTATTCAAGTTTCAAGATCTATTGGTGATGTATATTTGAAAAAGGCCGAGTTCAATAGGGAACCACTATATGTTAAGTTTCGACTTCGTGAGCCAATGAAGAGGCCAATACTGAGCTCAGAGCCATCGATATCGGTGCATCAGTTGCAGCCACATGATCAATTTATTATATTCGCTTCTGATGGGCTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAATAGTCCCCGAAGTGGAAGTGCAAGGAGGCTGGTGAAAACTGCACTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGATTTAAAGAAAATTGACCGTGGAGTTCGTCGACATTTCCATGATGATATTACTGTGATTGTTGTGTATCTTGACTCAAATCTCATAAGTAGGTCAAGCACTATTAAATTCCCTAGTATTTCTGTTAGAGGGGGCGGTATTAACCTGCGTACTAACACGCTGGCACCTTGTACGACACCAACAGATATTGGTGGTACCTGA 1194 0.4288 MLSELMNTFRSCFWPGSGGYAGTGSDAVGRQDGLLWYKDLGQHLNGEFSMAVVQANNLLEDQSQIESGSLSSNESGPFGTFVGIYDGHGGPETSRFINDHLFHHLKRFTSEQQSMSMDVIRKAFQATEEGFTSLVARQWLMKPQIAAVGSCCLVCVICNGTLFVANLGDSRAVLGRVVKATGEVLAMQLSTEHNASIESIRQELHSLHPDDSNIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYVKFRLREPMKRPILSSEPSISVHQLQPHDQFIIFASDGLWEHLSNQEAVDIVQNSPRSGSARRLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVYLDSNLISRSSTIKFPSISVRGGGINLRTNTLAPCTTPTDIGGT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3749g00051 397 CDD PP2Cc 48 355 IPR001932 -
Gabi3749g00051 397 SMART PP2C_4 41 353 IPR001932 -
Gabi3749g00051 397 Gene3D - 38 365 IPR036457 -
Gabi3749g00051 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Gabi3749g00051 397 PANTHER PROTEIN PHOSPHATASE 45 354 IPR015655 GO:0004722|GO:0006470
Gabi3749g00051 397 FunFam Phosphatase 2C family protein 36 365 - -
Gabi3749g00051 397 Pfam Protein phosphatase 2C 76 325 IPR001932 -
Gabi3749g00051 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Gabi3749g00051 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3749g00051 Gabi-Chr3749 575104 580050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3749g00051 1 392 PP2C-type Phosphatase Gene Family AT4G38520 75.000 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3749g00051 - K01102 gmx:100790374 706.057