Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3749g00035 ATGCCTGTGTTTTACATCAATATGCTCTTGTTGCTTGACGACAAGCAACATGCAGAGTTTGGAGATGTAAATCATCCATCGAATGCCTTTTCTCACTGGGTGGAGTGGGCTATAAGGATCCCACGAGATTTCAAGACCATCACTGATGCCATTAACTACATCCATACTGGGAACACCAAGCGTGTCATTGTCTATATTGGAGGTGCAAATTATAATGAGAAAATCAAAATTGAGAGGACAATGCCTTTTATGACATTATATGGGGCACCAGGGAACATGCCAAACTTGACCTTTGGTGGTACTGCAGAAAAATATGGTACTGTTGACAGTGCTACATTGATTGTTGAATCAGATTGCTTCGTGGCTGCTAACATCATTATCTCGATTTGTAATTTAGCACCAAGACCTGATGGAGAGAGATCAGGAGCCCAAGCGGTTGCGTTGAGAATTTCTGGTGACAAAGCAGCATTTTATAATTGCAAGCTATTTGGATTCTAA 498 0.4116 MPVFYINMLLLLDDKQHAEFGDVNHPSNAFSHWVEWAIRIPRDFKTITDAINYIHTGNTKRVIVYIGGANYNEKIKIERTMPFMTLYGAPGNMPNLTFGGTAEKYGTVDSATLIVESDCFVAANIIISICNLAPRPDGERSGAQAVALRISGDKAAFYNCKLFGF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3749g00035 165 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 42 165 - -
Gabi3749g00035 165 Gene3D - 28 165 IPR012334 -
Gabi3749g00035 165 Pfam Pectinesterase 43 165 IPR000070 GO:0030599|GO:0042545
Gabi3749g00035 165 SUPERFAMILY Pectin lyase-like 42 165 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3749g00035 Gabi-Chr3749 410508 412881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3749g00035 43 165 Carbohydrate Esterase AT1G69940 56.911 2.15e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3749g00035 K01051 - gmx:100775404 197.208