Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3744g00058 ATGGCTAGGAGCTGGCTTTTTGACATTGGAGGATTTGCAAAGAAAGTGAAAAATACTTCTCTGTCATCAGCTGATCAAATCAAGGACTTTGGAGCATATCGTGAATGCCCAAAATGTCATTACCATATTGATAACAGTGATGTTTCTTCTGAGTGGCCTGGCTTTCCTGCTGGTGTAAAGTTTGACCCTTCTGATGTTGAACTTTTGCAACATTTAGCAGCAAAATGTTGTATTGGAAACAAAGAGCAGCACATGTTTATCCATGAGTTCATCCCAACTATAGAAGGAGACCAGGGTATTTGCTACACACATCCAGAAAATCTTCCAGGTGCTAAGAAAGATGGGAGTAATGTCCATTTCTTTCACAGAACAGTTAATGCATATGCTACTGGACAAAGAAAGCGTAGAAAGATTCATCATCAACATGGTTTGACTGAGGAGAATGTGCGCTGGCACAAGACTGGTAAAACCAAACCTGTAATAGAAGATGGAGTACATAAGGGCTTTAAAAAGATCATGGTACTTTATATAAGATCTAAGAAAGGGTCCAAGCCATATAAATCCAATTGGGTGTTACATCAGTACCATCTAGGGAGTGAAGAAGATGAGAAGGATGGTGGATATGTGGTTTCAAAAATCTTTTATCAACAGAATAAGCAGACTGAGACAAATGAAGAGAGTTCAGTGGTTGAAGATTCTGACATGGCACCGCGAACAAGTCCAAGAACCCCAAAACCAAATCCTCCCAGTCGACCTTGTTCAGGCAAATGTGTTGATTGTGATGACAATTTTGATGAAAATGAACTTCTGTCATTCATCCAGGATGCCAAGTCTATACCTGGAATATCACATGCCCCACCATCTGTTATTCAAAATGAGGACAATACTGGTGAACCTGCATGGTTAGCTGGTGAATCACAGGCTGTTGTTGAAAACTGTGACTTTGATGGCTTGGAAGACATCTTATTATGCAAGGAGATGTTAGATTCTTCTACCCTCTTAAATGATTCTGGATTGAACTCTACCACTTTCAACAGCTTTGCTTCCGGTGCAAATAATTTGGCTGGAAATGATGATGTATCTTATGGAATTTCTGTCCTTGACACCCTGGAATTGGATACTCCTCCAGATTTTGATCTTTCTAATTTGCAATTTTGTTCTCAAGACAGTATCCTTCAGTGGATGGACAAGTTATAA 1197 0.3968 MARSWLFDIGGFAKKVKNTSLSSADQIKDFGAYRECPKCHYHIDNSDVSSEWPGFPAGVKFDPSDVELLQHLAAKCCIGNKEQHMFIHEFIPTIEGDQGICYTHPENLPGAKKDGSNVHFFHRTVNAYATGQRKRRKIHHQHGLTEENVRWHKTGKTKPVIEDGVHKGFKKIMVLYIRSKKGSKPYKSNWVLHQYHLGSEEDEKDGGYVVSKIFYQQNKQTETNEESSVVEDSDMAPRTSPRTPKPNPPSRPCSGKCVDCDDNFDENELLSFIQDAKSIPGISHAPPSVIQNEDNTGEPAWLAGESQAVVENCDFDGLEDILLCKEMLDSSTLLNDSGLNSTTFNSFASGANNLAGNDDVSYGISVLDTLELDTPPDFDLSNLQFCSQDSILQWMDKL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3744g00058 398 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 310 IPR044799 GO:0003700
Gabi3744g00058 398 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
Gabi3744g00058 398 Gene3D NAC domain 64 221 IPR036093 GO:0003677|GO:0006355
Gabi3744g00058 398 SUPERFAMILY NAC domain 39 216 IPR036093 GO:0003677|GO:0006355
Gabi3744g00058 398 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
Gabi3744g00058 398 MobiDBLite consensus disorder prediction 219 254 - -
Gabi3744g00058 398 FunFam NAC domain-containing protein 8 64 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3744g00058 Gabi-Chr3744 594411 598270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3744g00058 36 216 NAC Transcription Factor Family AT1G28470 56.452 3.10e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi3744g00058 NAM 3.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3744g00058 - - gmx:100780662 632.869