Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3744g00048 ATGCATAACTCGAACTTCCTCACCATATGCTTTCTATTCTTAAACATTTTAGTTAATTTTTCTCTGCCTTTATATACGCTCTATCTCTATACCATTACCTATATATATATATATATATTAATTATAAATTCAATGTCTTCATCTGGTACATGGAGTGCTCAAGAGGATAAAGCTTTTGAAAGGGCTCTAGCTGTTTATGACAAGGATACCCCTGACCGTTGGTGCAATGTTGCAAGGGCTGTTGGTGGAAAATCTCCTGAAGAAGTGAAGAGCCACTATGAGCACCTTGTTGAGGACGTTAAGCGTATTGAGTCAGGACAAGTTCCCTTCCCTATCTACAAGAATCCCAAAGCAGCATGA 360 0.3833 MHNSNFLTICFLFLNILVNFSLPLYTLYLYTITYIYIYILIINSMSSSGTWSAQEDKAFERALAVYDKDTPDRWCNVARAVGGKSPEEVKSHYEHLVEDVKRIESGQVPFPIYKNPKAA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3744g00048 119 ProSiteProfiles Myb-like domain profile. 43 97 IPR001005 -
Gabi3744g00048 119 SMART sant 47 99 IPR001005 -
Gabi3744g00048 119 Gene3D - 42 110 - -
Gabi3744g00048 119 SUPERFAMILY Homeodomain-like 43 100 IPR009057 -
Gabi3744g00048 119 ProSiteProfiles SANT domain profile. 46 101 IPR017884 -
Gabi3744g00048 119 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 44 116 IPR044636 GO:0003700
Gabi3744g00048 119 FunFam Transcription factor SRM1 43 110 - -
Gabi3744g00048 119 Pfam Myb-like DNA-binding domain 49 93 IPR001005 -
Gabi3744g00048 119 CDD SANT 50 97 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3744g00048 Gabi-Chr3744 503454 503813 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi3744g00048 Myb_DNA-binding 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3744g00048 - - aprc:113867554 133.265