Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3744g00046 ATGGAAACACCACCGTCACAAGCCACCGCCTCCGCCGCCAAGCTCCGCCTCATGTGCAGCTACGGCGGCTACATACTCCCTCGTCCACGCACCAACTCTCTCTGCTACGCCGGCGGAGAAACCCGCATCGTTTCAATCGAGCGCCGCGCCGTCACCACACTCTCCTCTTTGATTTCGCACCTCTCTTCAACTCTCTCCATAAACTTCCCTTTCACTCTCAAGTACCAGCTTCCCCATCTCGACCTCGACTCGCTTATCTCACTCGCCTCCGATGAAGATCTCCACATCCTCATCGACGAGCACAACCGCCTCGCCTCTTCTTCCCCTTCTCCCTCACGCATCAGACTCTTTGTTTTCCCCGAATCGGGTCGACCCGTTATTCGCCACCCGAAAACGGAGTCTTGGTTCTTCGATGCCCTCAAGAGTGCTAAGATTATGCAAAACGGTGCGGAGGAGGGTGAACCTAACCACTTTGTCTCTTCTGCCCCTGAATCCATCGTTTTGGAGACAAGTTCCTCTTTTGGGTCAACTTCCTCTTCATCTTCCTTCACCAATTTGCCTCCTGTAAGAGCTCACTTTGAAGACAAGTTCACCTCTTCCGATACAATTCCAAGTGATAATACTGTTTCAAGTGTTATGTCTCCTCAGCAGAATATATCTTACCAAGAACCTGTGGTTCATGTTTCGGAGGCTAGAGTCAATGCTGAGTCCATTGAAGTTGAAAGTAAAATCCCTTACATTTCGTCGGGTTTCATAGCGAATAACACCAATGTGGATATAGGGTATACTTCATGTCCACAGTTTAATCAAGTGGAGAGGCCACATTTGCAGTTTGTGCAAGCTGCTACACACTTTTTACCACTTCACCCGAGTGGTCTGTTGCCAGTACCATCTCTGCAGCACATTTACCAGCAACCACGTCCATTGCAGCATATGGTTTATCATGCTAATCAACCTTGCCCGGTATACCTTGTGCCTATTGGAAACATGCCTCCCAATAGTTTGCCTATAAGTGCAGCTAGCCAAGCTTCATTGAATCTTAATGCTTCCTTAATGAATTGTCATGTAGCTCACAATCCTGAGGTGGGAGCCAGGTCTCCTTTTGCTCATGATTTTACTTCTCAGAATTACTTAACTAACAATGCAATTGCATCGGTTGTTCATGTACCTTACAATGGAAGTCAGCAAAAAGAAATGGATATTTATCAAATGCATAATCAATCTCAGTCTCAGAATGTATCTATTACTCCCAGGGAATCTCCCGAGTATGAAAATGAACTTGATGATGACCTTGCTCGTGTTCAGATATACAAATCTCAGCCCCCACCTCCCACATTACCTTCTAAATACAAAACAATGGCAAAAGCTACAACAGACCCGATGTCGGAGGCTCTTGCTCAGTTGCATGTGGATAACCACAAGCAGCAGACAGAAACATTACAGCCACAGTGA 1452 0.4676 METPPSQATASAAKLRLMCSYGGYILPRPRTNSLCYAGGETRIVSIERRAVTTLSSLISHLSSTLSINFPFTLKYQLPHLDLDSLISLASDEDLHILIDEHNRLASSSPSPSRIRLFVFPESGRPVIRHPKTESWFFDALKSAKIMQNGAEEGEPNHFVSSAPESIVLETSSSFGSTSSSSSFTNLPPVRAHFEDKFTSSDTIPSDNTVSSVMSPQQNISYQEPVVHVSEARVNAESIEVESKIPYISSGFIANNTNVDIGYTSCPQFNQVERPHLQFVQAATHFLPLHPSGLLPVPSLQHIYQQPRPLQHMVYHANQPCPVYLVPIGNMPPNSLPISAASQASLNLNASLMNCHVAHNPEVGARSPFAHDFTSQNYLTNNAIASVVHVPYNGSQQKEMDIYQMHNQSQSQNVSITPRESPEYENELDDDLARVQIYKSQPPPPTLPSKYKTMAKATTDPMSEALAQLHVDNHKQQTETLQPQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3744g00046 483 CDD PB1_UP2 18 119 - -
Gabi3744g00046 483 SMART PB1_new 29 121 IPR000270 GO:0005515
Gabi3744g00046 483 SUPERFAMILY CAD & PB1 domains 32 126 - -
Gabi3744g00046 483 PANTHER OS05G0427100 PROTEIN-RELATED 7 374 - -
Gabi3744g00046 483 MobiDBLite consensus disorder prediction 437 457 - -
Gabi3744g00046 483 Pfam PB1 domain 30 120 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3744g00046 Gabi-Chr3744 486524 489669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3744g00046 15 120 MAP Kinase Kinase Kinase AT1G04700 49.057 3.07e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3744g00046 - - aip:107644557 513.072