Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3744g00022 ATGGAGAGGGAGAGTCCTCCTGCAAACGATCTGTGTTCAGTGTGTCATAGCGATTTCCACACTCCATGCCAAGCTAACTGTTCTCACTGGTTTTGCGGGAATTGTATTATCTTGGTGTGGCAGCATGGATCGACTCAGCAACCTTGTAAGTGTCCACTCTGTCGTCGTATCATTACTTTGTTGGTTCCATCCGAAGAATCTCAAAGGCAACGCCATGACCCTGAAGTGGCTCAGATTCTAGACAAGATTCAAACCTATAATCGATTCTTTGGTCGAACCTCAACGGGTCTCCTTCAGAGGATGCAAGATCTTCCTTTTCTGTTGCCAAGGCTTCTTCGGGAATTCTTGGACCCTCACAGATCCCTTCCTCTTGTCATTAGAGCTCGTGTTTATATTGCAATGATACTAAGTGCTGTATACATCGTCAGTCCTATTGACATAATTCCTGAAGGGATACTAGGAATAGTTGGTTTATTGGATGATCTCCTAATTGGGCTCATATGCTTCCTGCATATTGCTGCCCTTTATAGATCAGTACTCTACACCCGTCATGGGGGTTCCTGA 564 0.4504 MERESPPANDLCSVCHSDFHTPCQANCSHWFCGNCIILVWQHGSTQQPCKCPLCRRIITLLVPSEESQRQRHDPEVAQILDKIQTYNRFFGRTSTGLLQRMQDLPFLLPRLLREFLDPHRSLPLVIRARVYIAMILSAVYIVSPIDIIPEGILGIVGLLDDLLIGLICFLHIAALYRSVLYTRHGGS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3744g00022 187 ProSiteProfiles Zinc finger RING-type profile. 12 55 IPR001841 -
Gabi3744g00022 187 Pfam Protein of unknown function (DUF1232) 132 164 IPR010652 -
Gabi3744g00022 187 PANTHER UNCHARACTERIZED 3 184 IPR038896 GO:0061630
Gabi3744g00022 187 SUPERFAMILY RING/U-box 9 61 - -
Gabi3744g00022 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 102 IPR013083 -
Gabi3744g00022 187 SMART ring_2 12 54 IPR001841 -
Gabi3744g00022 187 ProSitePatterns Zinc finger RING-type signature. 27 36 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3744g00022 37 187 C3H Transcription Factor Family AT1G72175 75.497 2.72e-69 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3744g00022 K15707 - jre:109000985 283.108