Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3739g00002 ATGGATGGTATAGGAGAAGACCCACTCGACTGGGAAGCTTTCCTTGACCACTTACCAGAATTTGAAATTGATGATTTTTTTTTGGAGGATACTCCTGTTGAAGTCGCCGCCGCCGATGATCCATCACCGAACCCTTCTTTATCGGAGATCGAGAACTTGCTGATGGCAGACGCCGATGTAATTCCTGGAACGCCGTCGTCGAAGTCCGACTACGACAAGCTCCTCGCGGAGATTCTCGTCGAGCCGAGCGCTGAGTCCGAAGACGGTTCAACTCCTTCCGACAAAGATAGAGTCGATGCTGCAACTCCCGAAGATGATGCCGATGAACCAGAAGTCAAGAAACTCAGAAGGCAGATGAGGAACAGGGATGCTGCTGTGAGATCAAGAGAACGGAAGAAGTCTTATGTTAAAGATCTTGAGATGAAGAGTAAGTTTTTTGAAGGGGAATGCAGAAGACTGGGGCATTTGCTCCAGTGCTGCTATGCTGAGAACCATGCTTTGCGGTTTTCCTTGCAATCGCGTGGTGCATTTGGTGCTTCCATGACCAAGCAGGAGTCTGCCGTGCTCTTGTTGGAATCCCTGCTGTTGGGTTCCCTGCTGCGGTTCATGGGCATCATGTGCCAATTCAGCCTACCCCTGATACTGTGGTTAACAGTAGTACTTCCAAGAGAAAACATGGAACAGAAAGGCCTAAGAAGAGTGGGTCGAAAAGGGCCGGAAAGTAAGATCTCTGATTACTTCCGCTTGCAATCATTTGTAAAGAGTAGAAGATGCCGAGCTTCAAGAACAAAGATGAAATTTGAGTTCCTCATGTTCTATAAGTTTTGA 828 0.4783 MDGIGEDPLDWEAFLDHLPEFEIDDFFLEDTPVEVAAADDPSPNPSLSEIENLLMADADVIPGTPSSKSDYDKLLAEILVEPSAESEDGSTPSDKDRVDAATPEDDADEPEVKKLRRQMRNRDAAVRSRERKKSYVKDLEMKSKFFEGECRRLGHLLQCCYAENHALRFSLQSRGAFGASMTKQESAVLLLESLLLGSLLRFMGIMCQFSLPLILWLTVVLPRENMEQKGLRRVGRKGPESKISDYFRLQSFVKSRRCRASRTKMKFEFLMFYKF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3739g00002 275 MobiDBLite consensus disorder prediction 82 111 - -
Gabi3739g00002 275 MobiDBLite consensus disorder prediction 88 111 - -
Gabi3739g00002 275 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 111 153 IPR004827 GO:0003700|GO:0006355
Gabi3739g00002 275 SUPERFAMILY Leucine zipper domain 112 169 IPR046347 GO:0003700|GO:0006355
Gabi3739g00002 275 CDD bZIP_HY5-like 114 165 - -
Gabi3739g00002 275 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 116 131 IPR004827 GO:0003700|GO:0006355
Gabi3739g00002 275 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 9 241 - -
Gabi3739g00002 275 Pfam bZIP transcription factor 109 153 IPR004827 GO:0003700|GO:0006355
Gabi3739g00002 275 Gene3D - 112 174 - -
Gabi3739g00002 275 SMART brlzneu 109 173 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3739g00002 42 272 bZIP Transcription Factor Family AT1G42990 31.835 1.21e-19 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3739g00002 bZIP_1 7.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3739g00002 - - ahf:112743660 322.013