Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3738g00003 ATGTCTTCCTTTCTCATCTGTAGGAAGAGAAAACGATGCCCCAAGATTTTCAGGTTCCACTCTTTCGCTGACCATGGTTGCCCCATCACACCTTCTGGTCCCTTCCGCGACAACGTTCGGTTATTTCTTCAAGAAGCCGGACAACTCCAAGATTACAATGTCTCTGGCAACCCACTGTGGTGCACCCTTCTCAACCCCGACAGTACTAACCTAACGGCTCCTCTCTACACCATCGAAGAGGACGTTAACCGGTCTTCCCATCCCTTCTGCGATCATTGCCGCTGTGTAGGTTGGAGCGGCCATTATGTATCAAAGAGAAGGTACCATTTTATAATCCCGCTGGACAACGGGTGGCATAAACCCTTAAGTGAAGGTGCTCTTGATAATCAGAGTCATCTCTTGCATGGGATTATTCACTGCAATGGATACGGTCATTTGCTTTGCATTAATGGCATAGAAGGGGCTTCTAAAGTTCTCAGTGGGAGAGAGATCATGGATCTCTGGGACAGGATCTGCATCAATCTTCGAGCAAGGAAAATTGCAGTGGAAGATGCTGCAAGGAAGCGGTCTATGGATCTTCGGTTACTTCATGGAGTTGCTTATGGGCACTCTTGGTTTGGTCGGTGGGGCTATAGATTTTGCCGTGGAAGCTTCGGTCTAACTGAGGAAAATTATTATGAAGCAATCGAGGCTCTTGGTACTTTGGAGCTGGAAAAGATTGTAAAAGATTTAAGCAAGACAGAGTGCTATAAAGAAATCAAACAAATGATTCGCTGCTACAGAGATATGAGTGAAGCTCAGATTATCACAATCAGAGATCTTCTCAGGTTTATGCTTACTGTCAGGTCTCGTGCTTCTGTTTCTAAGATAACAGTCATTTCTTCTGCTGCTCCTCCCATGAAGGAAAAATCTGCTAGGTATAAGAAGTTCAGCTGTGCAGTGATTTCTATGGATAGCAGGTGGCCAACAAGAAGACTAGAGTTTGCAGCTCAAGTGATTGTTGATGCACTTAAAGAGAACAAGGCTGCCAAATCAGGTTCTTGTGGGATGACAAGACAAGATGTGAGAGATGCAGCTCGGCTCCATATTGGTGATACGGGCTTACTGGATTATGTGCTGAAATCACTTAACAATGTGATTGTTGGAAATTTTGTTGTTCGTCGCAAGGTGAACCCATCAACTAGGATCCTGGAATATAGTATCGATGAGCTTGGCAAGGGGTTCAAAGCCCCTGAACTGGAGTCTGGGGTAATGGCTGTTATAGATCCCAAAGTAGAATCATCTTGGGTTCCTGGTAATGATGTCTACAATGATGTGTTTTATTTGTACAAAAATGTACTATTAGGCTACCTTGATTCAGAACCAGTGGACCTTGTAGCTCGGACAATTCTTCACAGCAGGCACTTCGTGAAGGAGTGGGCTTTAAGGGATGAAATGAAGCAGGTGTTGACATTCGTTTGCCGCTTGAAGCTAAATTTTGTGGACACTAAGTCTGAGTTGAAAGGGCTACCTTGTGGCGAGATTGTTATGGTTCCACTGCATGCAACAGTGGGAGACTTGAAGCAAGCTGCGGAGGCTGCTCTGAGGGATACTTACTGCATTGCAGAAAGGCTTATAGTGACAGAAATTGTAGAATTGATGGATGCAAGTGATGAGGAAGTCCTTTTTGGACTAATCCAGTCTGGTGTGGAACTTTCTGTGAGGGGTTTTGCCATAGATTTGTGTACTCCATTGAAGTATCAGGGAGGGTCTGACAATTGGAAGGTGAGGTGTGACTGTGGTGCTGCTGACGATGATGGTGAAAGAATGGTGGCTTGTGACATCTGTGAAGTGTGGAAGCATACACGCTGCTGTGGAATCGATGACTCAGTGACAGTGCCACCATTGTTTGTGTGCTCTAGCTGTTGGGATTCACTTGTACCCCCAAGGATTGAATCCGGCTTGACTGTGGATTGTGCTGATGATTTTCTGATTCCAACAGAGCCTACCCACTTACTGGAGTATGGGTATGGTTACTGA 2019 0.4527 MSSFLICRKRKRCPKIFRFHSFADHGCPITPSGPFRDNVRLFLQEAGQLQDYNVSGNPLWCTLLNPDSTNLTAPLYTIEEDVNRSSHPFCDHCRCVGWSGHYVSKRRYHFIIPLDNGWHKPLSEGALDNQSHLLHGIIHCNGYGHLLCINGIEGASKVLSGREIMDLWDRICINLRARKIAVEDAARKRSMDLRLLHGVAYGHSWFGRWGYRFCRGSFGLTEENYYEAIEALGTLELEKIVKDLSKTECYKEIKQMIRCYRDMSEAQIITIRDLLRFMLTVRSRASVSKITVISSAAPPMKEKSARYKKFSCAVISMDSRWPTRRLEFAAQVIVDALKENKAAKSGSCGMTRQDVRDAARLHIGDTGLLDYVLKSLNNVIVGNFVVRRKVNPSTRILEYSIDELGKGFKAPELESGVMAVIDPKVESSWVPGNDVYNDVFYLYKNVLLGYLDSEPVDLVARTILHSRHFVKEWALRDEMKQVLTFVCRLKLNFVDTKSELKGLPCGEIVMVPLHATVGDLKQAAEAALRDTYCIAERLIVTEIVELMDASDEEVLFGLIQSGVELSVRGFAIDLCTPLKYQGGSDNWKVRCDCGAADDDGERMVACDICEVWKHTRCCGIDDSVTVPPLFVCSSCWDSLVPPRIESGLTVDCADDFLIPTEPTHLLEYGYGY 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3738g00003 672 CDD PHD_MMD1_like 591 635 - -
Gabi3738g00003 672 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 8 643 - -
Gabi3738g00003 672 SUPERFAMILY FYVE/PHD zinc finger 583 641 IPR011011 -
Gabi3738g00003 672 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 578 641 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3738g00003 Gabi-Chr3738 22821 27139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3738g00003 6 641 PHD Transcription Factor Family AT5G22260 33.138 3.85e-119 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3738g00003 K26271 - gmx:100797388 1016.53