Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3729g00061 ATGGGATTTCCAACGGGATATCCCGAGGTTGTGTTACCAAAGCTGTTTATGCACCTCCTTTCCTTATTGGGTTTCATCAGAGAACTCATCACCGTCCTCTTATGCTATCTCGGTCTCCACGATTTCCTCCAACCGGACATTGCCTGGCCCGACCGGATATCGGAGTTCCAATCGGTGTCTTCACTGCTGATCCGGGATATCCTGCCGGTGGTGAAGTTCTCCGACGTGGTGGACCCGCCGGAGAGCTGCGCCGTTTGCCTCTACGAATTCGAGACAGAAGACGAGATCAGACGGCTCACAAACTGCCGCCACATATTCCACAGGGGTTGCCTGGACCGTTGGATGGGATACCATCAGAGAACGTGCCCCTTGTGCAGGACACCCTTCATACCCTATGATATGCAAGGTGCCTTCAATGAGATACTCTGCGCAGCTTCTGGGATTGATGAGTGTCCTCCCATCACGCCTTTGTAG 474 0.5338 MGFPTGYPEVVLPKLFMHLLSLLGFIRELITVLLCYLGLHDFLQPDIAWPDRISEFQSVSSLLIRDILPVVKFSDVVDPPESCAVCLYEFETEDEIRRLTNCRHIFHRGCLDRWMGYHQRTCPLCRTPFIPYDMQGAFNEILCAASGIDECPPITPL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3729g00061 157 ProSiteProfiles Zinc finger RING-type profile. 83 126 IPR001841 -
Gabi3729g00061 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 131 IPR013083 -
Gabi3729g00061 157 SMART ring_2 83 125 IPR001841 -
Gabi3729g00061 157 PANTHER RING ZINC FINGER PROTEIN-RELATED 22 132 - -
Gabi3729g00061 157 Pfam Ring finger domain 82 126 IPR001841 -
Gabi3729g00061 157 SUPERFAMILY RING/U-box 63 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3729g00061 Gabi-Chr3729 581775 582250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3729g00061 1 147 C3H Transcription Factor Family AT1G63840 56.494 4.52e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3729g00061 K16281 - jre:108997441 248.44